Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
LCE3DQ9BYE3 AC009541.1-201ENST00000438279 2662 ntBASIC1.5□□□□□ -2.17
LCE3DQ9BYE3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
LCE3DQ9BYE3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC1.5□□□□□ -2.17
LCE3DQ9BYE3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
LCE3DQ9BYE3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
LCE3DQ9BYE3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LCE3DQ9BYE3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
LCE3DQ9BYE3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
LCE3DQ9BYE3 AC015813.6-201ENST00000624409 5808 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AC010266.2-201ENST00000564741 3255 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AL109809.4-201ENST00000603520 2185 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 USP8P1-201ENST00000494673 3183 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AC107068.1-201ENST00000563286 4218 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 COX6B1P3-201ENST00000312310 260 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AC010894.1-201ENST00000313760 361 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AC092268.1-201ENST00000342691 405 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 RNA5SP308-201ENST00000362532 115 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 RNA5SP301-201ENST00000362537 121 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 SNORA31-201ENST00000362607 130 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 Y_RNA.44-201ENST00000362676 108 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 RNU1-5P-201ENST00000362684 144 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 Y_RNA.136-201ENST00000363444 102 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 Y_RNA.143-201ENST00000363520 106 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 Y_RNA.150-201ENST00000363562 102 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 RNA5SP429-201ENST00000363688 109 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 Y_RNA.199-201ENST00000364014 102 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 RNU6-1141P-201ENST00000364520 107 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 Y_RNA.275-201ENST00000364726 110 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 Y_RNA.277-201ENST00000364754 102 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 U3.15-201ENST00000365398 212 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 SNORD50.2-201ENST00000365465 70 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 RN7SKP269-201ENST00000365545 319 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 RNU1-73P-201ENST00000383971 164 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 RNU6-318P-201ENST00000384283 103 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 SNORD56.6-201ENST00000384569 71 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 Y_RNA.570-201ENST00000384750 101 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 SNORA46.1-201ENST00000391069 153 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 RNU6-1197P-201ENST00000391183 107 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AL078599.1-201ENST00000402075 293 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 SNORA11B-201ENST00000408175 129 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 SNORA11D-201ENST00000408548 128 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 SNORA11E-201ENST00000408778 128 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 RN7SKP146-201ENST00000410242 334 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 RN7SKP205-201ENST00000410999 307 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 RNU6-1245P-201ENST00000411130 106 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AC007738.1-201ENST00000413892 348 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 COX5BP7-201ENST00000414780 274 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 TMSB10P2-201ENST00000416049 131 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 PTPN2P1-201ENST00000423212 1072 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 HMGN2P30-201ENST00000423237 256 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 ELOBP4-201ENST00000423418 296 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AC078809.1-201ENST00000427601 140 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AC007389.2-201ENST00000434630 306 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 Z82188.1-201ENST00000436709 154 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AL353662.1-201ENST00000439099 327 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AL390119.1-201ENST00000440329 312 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AC098831.1-201ENST00000440661 216 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AC243964.1-201ENST00000441814 261 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AC007969.2-201ENST00000441891 191 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AC016700.2-201ENST00000446011 156 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AL353705.4-201ENST00000449661 238 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 PPIAP7-201ENST00000454070 489 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 U8.22-201ENST00000459141 133 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 RNU7-87P-201ENST00000459343 62 ntBASIC1.49□□□□□ -2.17
LCE3DQ9BYE3 RNA5SP103-201ENST00000459503 118 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms