Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 RPL23AP35-201ENST00000451906 501 ntBASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 RPL30P6-201ENST00000475925 342 ntBASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 AC126389.1-201ENST00000477436 290 ntBASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 TRBV12-1-201ENST00000479785 344 ntBASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 AC090453.1-201ENST00000495560 436 ntBASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 OR5H5P-201ENST00000503164 928 ntBASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 AC093767.1-201ENST00000504523 156 ntBASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 AC117532.1-201ENST00000514638 323 ntBASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 AC087481.2-201ENST00000565492 330 ntBASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 PIGPP4-201ENST00000584447 307 ntBASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 AL669831.4-202ENST00000590817 238 ntBASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 AC008739.2-201ENST00000597006 317 ntBASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 AC245008.1-201ENST00000608123 476 ntBASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 AC104237.2-201ENST00000612456 443 ntBASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 AL355810.1-201ENST00000614629 552 ntBASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 AC091931.1-201ENST00000623488 728 ntBASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 AC099063.3-201ENST00000642066 185 ntBASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 AL022578.1-201ENST00000439330 1433 ntBASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 MTND4P16-201ENST00000466108 1367 ntBASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.22□□□□□ -2.05
RSPO3Q9BXY4 GDI2P1-201ENST00000429312 1336 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 AL513185.3-201ENST00000433335 1300 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 OR56A5-201ENST00000340110 738 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 RNU6-289P-201ENST00000364093 107 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 SNORD82-201ENST00000365530 70 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 RNU6-723P-201ENST00000383973 107 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 RNU1-138P-201ENST00000384093 164 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 SNORA41-201ENST00000384675 132 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 RNU6-253P-201ENST00000384730 105 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 U3.29-201ENST00000391296 212 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 TPMTP3-201ENST00000411928 735 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 NPM1P11-201ENST00000417106 855 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 AC016907.1-201ENST00000419483 435 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 AC019178.2-201ENST00000423595 505 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 AC007742.1-201ENST00000425789 329 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 SUMO1P4-201ENST00000429430 302 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 AC092427.1-202ENST00000430569 476 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 MTCYBP45-201ENST00000435243 565 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 ELOCP26-201ENST00000436067 329 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 TAF9P1-201ENST00000445421 515 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 MTCO1P27-201ENST00000448269 226 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 EPS15P1-201ENST00000448836 336 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 KATNBL1P6-201ENST00000453433 915 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 USP9YP10-201ENST00000454868 628 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 TAF9P2-201ENST00000454958 515 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 MEMO1P3-201ENST00000459811 302 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 AC072039.1-201ENST00000477611 581 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 HSPE1P6-201ENST00000479457 291 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 HMGB1P36-201ENST00000487709 576 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 RPL37P25-201ENST00000507308 276 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 RNA5SP148-201ENST00000516527 94 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 RNU6-678P-201ENST00000516832 109 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 AC109329.2-201ENST00000519658 482 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 AC060788.1-201ENST00000521318 469 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 OR4R1P-201ENST00000529879 463 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 MIR5194-201ENST00000582634 120 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 AC004223.2-201ENST00000590309 544 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 AP001981.2-201ENST00000603241 418 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 MTCYBP22-201ENST00000603788 447 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 AL049779.4-201ENST00000604500 156 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 AC107214.2-201ENST00000608204 634 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 AC106028.5-201ENST00000610332 395 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 AL356266.1-201ENST00000623311 483 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 AP003399.1-201ENST00000637534 361 ntBASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.21□□□□□ -2.06
RSPO3Q9BXY4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 RNU6-339P-201ENST00000384310 107 ntBASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 SNORA67.4-201ENST00000384688 142 ntBASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 MT-TC-201ENST00000387405 66 ntBASIC2.2□□□□□ -2.06
RSPO3Q9BXY4 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms