Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
RPAP1Q9BWH6 Y_RNA.192-201ENST00000363977 102 ntBASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 Y_RNA.465-201ENST00000384293 102 ntBASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 SNORA64-201ENST00000384674 134 ntBASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 RNU2-25P-201ENST00000411041 191 ntBASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 SPA17P1-201ENST00000416656 452 ntBASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 AC008850.1-201ENST00000427546 362 ntBASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 AL590383.1-201ENST00000428602 75 ntBASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 RPL21P134-201ENST00000453468 483 ntBASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 AL135752.1-201ENST00000479477 471 ntBASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 CKS1BP2-201ENST00000497342 240 ntBASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 RNU6-1256P-201ENST00000516539 103 ntBASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 SCARNA16.3-201ENST00000516595 184 ntBASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 RNU6-1282P-201ENST00000516735 96 ntBASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 AC023813.2-201ENST00000564321 469 ntBASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 AC006270.3-201ENST00000605967 1036 ntBASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 AL603758.1-201ENST00000618654 241 ntBASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 MIR6132-201ENST00000622083 109 ntBASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 AL159972.1-201ENST00000625150 448 ntBASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 OR5H6-203ENST00000642105 978 ntBASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 AC022336.2-201ENST00000568966 2538 ntBASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.64□□□□□ -1.99
RPAP1Q9BWH6 RNA5SP139-201ENST00000364340 117 ntBASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 RNU6-637P-201ENST00000384050 107 ntBASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 AL356421.1-201ENST00000403255 413 ntBASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 AL023284.1-201ENST00000403956 276 ntBASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 AL031313.1-201ENST00000448435 256 ntBASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 MEMO1P3-201ENST00000459811 302 ntBASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 RPL23AP42-201ENST00000471152 471 ntBASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 AC021382.1-201ENST00000483523 359 ntBASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 AC135721.1-201ENST00000497954 479 ntBASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 MTND3P3-201ENST00000505004 126 ntBASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 IGLV3-17-201ENST00000519099 244 ntBASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 AC124947.2-202ENST00000552735 133 ntBASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 NBEAP1-201ENST00000554452 979 ntBASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 MIR4509-3-201ENST00000578671 94 ntBASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 AC103810.1-201ENST00000579873 453 ntBASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 MIR4509-2-201ENST00000583920 94 ntBASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 U73023.1-201ENST00000603134 700 ntBASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 MIR4509-1-201ENST00000618224 94 ntBASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 SDAD1P2-201ENST00000441308 2028 ntBASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 CKAP2P1-201ENST00000555477 2049 ntBASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 AC010680.1-201ENST00000590024 3590 ntBASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 AC138915.1-201ENST00000565427 1685 ntBASIC2.63□□□□□ -1.99
RPAP1Q9BWH6 RNU6-289P-201ENST00000364093 107 ntBASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 Y_RNA.238-201ENST00000364441 102 ntBASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 MIR144-201ENST00000384886 86 ntBASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 GSTA9P-201ENST00000406231 611 ntBASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 RNA5SP247-201ENST00000411181 105 ntBASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 TPMTP3-201ENST00000411928 735 ntBASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 USP9YP33-201ENST00000412220 421 ntBASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 MTND1P23-201ENST00000416931 372 ntBASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 MTCYBP38-201ENST00000417160 1123 ntBASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 RPL7L1P10-201ENST00000427790 463 ntBASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 USP9YP35-201ENST00000435696 412 ntBASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 MTND2P39-201ENST00000457230 764 ntBASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 AC092798.1-201ENST00000458542 409 ntBASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 AC104563.1-201ENST00000476147 376 ntBASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 TRBV1-201ENST00000476502 284 ntBASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 AC021146.8-201ENST00000507455 733 ntBASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 MIR5694-201ENST00000581190 76 ntBASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 MIR6895-201ENST00000613497 78 ntBASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 AC079597.1-201ENST00000624306 508 ntBASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 AC110079.1-202ENST00000635213 138 ntBASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 MIR4275-201ENST00000636486 87 ntBASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 MIR219B-201ENST00000637023 88 ntBASIC2.62□□□□□ -1.99
RPAP1Q9BWH6 AC011477.1-204ENST00000623416 1325 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms