Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.23□□□□□ -2.05
FOXC2Q99958 AC109445.1-201ENST00000512356 383 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.23□□□□□ -2.05
FOXC2Q99958 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.23□□□□□ -2.05
FOXC2Q99958 AC023050.2-201ENST00000544968 387 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.23□□□□□ -2.05
FOXC2Q99958 AC087465.1-201ENST00000560574 245 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.23□□□□□ -2.05
FOXC2Q99958 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.23□□□□□ -2.05
FOXC2Q99958 AL355877.2-201ENST00000603670 358 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 AC131235.4-201ENST00000609288 620 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 LRRC77P-213ENST00000637727 880 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 AC241585.2-209ENST00000638217 143 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
FOXC2Q99958 AC092593.1-201ENST00000515413 1815 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 PABPC1P9-201ENST00000426076 1612 ntBASIC2.23□□□□□ -2.05
FOXC2Q99958 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.23□□□□□ -2.05
FOXC2Q99958 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
FOXC2Q99958 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
FOXC2Q99958 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.22□□□□□ -2.05
FOXC2Q99958 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
FOXC2Q99958 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
FOXC2Q99958 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.22□□□□□ -2.05
FOXC2Q99958 RNA5SP289-201ENST00000362332 137 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 SNORD62.1-201ENST00000362541 86 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 RNU6-157P-201ENST00000383957 107 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 RNU6-140P-201ENST00000384566 108 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 RNU6-114P-201ENST00000384704 105 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 MIR27B-201ENST00000385129 97 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 MIR181B1-201ENST00000385240 110 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 RPL23AP29-201ENST00000397284 453 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 AL590084.2-201ENST00000401481 382 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 AL356421.1-201ENST00000403255 413 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
FOXC2Q99958 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.22□□□□□ -2.05
FOXC2Q99958 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.22□□□□□ -2.05
FOXC2Q99958 AL953862.1-201ENST00000423016 168 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.22□□□□□ -2.05
FOXC2Q99958 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.22□□□□□ -2.05
FOXC2Q99958 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.22□□□□□ -2.05
FOXC2Q99958 AC007919.1-201ENST00000429380 217 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.22□□□□□ -2.05
FOXC2Q99958 RPL39P40-201ENST00000445481 146 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 RPL23AP11-201ENST00000475260 469 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 RPS15AP34-201ENST00000487776 387 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.22□□□□□ -2.05
FOXC2Q99958 AIG1P1-201ENST00000503376 148 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.22□□□□□ -2.05
FOXC2Q99958 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
FOXC2Q99958 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.22□□□□□ -2.05
FOXC2Q99958 RNA5SP76-201ENST00000516277 87 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
FOXC2Q99958 AC022634.1-201ENST00000520765 532 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 COX6CP5-201ENST00000527162 228 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.22□□□□□ -2.05
FOXC2Q99958 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
FOXC2Q99958 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.22□□□□□ -2.05
FOXC2Q99958 MTCO3P13-201ENST00000577757 781 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.22□□□□□ -2.05
FOXC2Q99958 HMGN2P15-201ENST00000585707 270 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.22□□□□□ -2.05
FOXC2Q99958 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.22□□□□□ -2.05
FOXC2Q99958 AL627309.6-201ENST00000606857 840 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 AC007349.4-201ENST00000608114 532 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 AL359198.2-201ENST00000611836 194 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 AC034102.8-201ENST00000615146 484 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 AC140725.3-201ENST00000616193 880 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 Z99129.2-201ENST00000619967 314 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 AC010338.1-201ENST00000621823 717 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 PISRT1-201ENST00000626175 531 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 AC116618.1-201ENST00000634617 774 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
FOXC2Q99958 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.22□□□□□ -2.05
FOXC2Q99958 DDX43P2-201ENST00000604753 1354 ntBASIC2.22□□□□□ -2.05
FOXC2Q99958 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
FOXC2Q99958 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
FOXC2Q99958 RPL21P132-201ENST00000331267 462 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 RNU6-223P-201ENST00000362830 107 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 RNU1-39P-201ENST00000383897 165 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 ANAPC10P1-201ENST00000395991 556 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 MIR1284-201ENST00000408337 120 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 AL513331.1-201ENST00000411908 397 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.21□□□□□ -2.06
FOXC2Q99958 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.21□□□□□ -2.06
FOXC2Q99958 AL096701.2-201ENST00000416920 238 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 MTCYBP38-201ENST00000417160 1123 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 RPL22P18-201ENST00000417197 377 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.21□□□□□ -2.06
FOXC2Q99958 HMGB1P49-201ENST00000418882 569 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.21□□□□□ -2.06
FOXC2Q99958 ISCA1P6-201ENST00000427740 390 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.21□□□□□ -2.06
FOXC2Q99958 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.21□□□□□ -2.06
FOXC2Q99958 HMGN2P3-201ENST00000433603 273 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.21□□□□□ -2.06
FOXC2Q99958 RPL35AP22-201ENST00000436855 335 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 HMGN2P5-201ENST00000436882 273 ntBASIC2.21□□□□□ -2.06
FOXC2Q99958 UBE2V1P13-201ENST00000436983 439 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms