Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.45□□□□□ -1.86
NPAS1Q99742 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.45□□□□□ -1.86
NPAS1Q99742 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.45□□□□□ -1.86
NPAS1Q99742 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.45□□□□□ -1.86
NPAS1Q99742 AC106782.4-201ENST00000568264 210 ntBASIC3.45□□□□□ -1.86
NPAS1Q99742 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.45□□□□□ -1.86
NPAS1Q99742 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.45□□□□□ -1.86
NPAS1Q99742 AC013553.2-201ENST00000604244 589 ntBASIC3.45□□□□□ -1.86
NPAS1Q99742 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.45□□□□□ -1.86
NPAS1Q99742 AC090132.2-201ENST00000615881 347 ntBASIC3.45□□□□□ -1.86
NPAS1Q99742 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPAS1Q99742 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPAS1Q99742 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
NPAS1Q99742 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NPAS1Q99742 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.44□□□□□ -1.86
NPAS1Q99742 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
NPAS1Q99742 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.44□□□□□ -1.86
NPAS1Q99742 FAM35BP-202ENST00000497389 3337 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPAS1Q99742 MAPK10-373ENST00000641983 6772 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 RNA5SP124-201ENST00000362739 110 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 RNU6-552P-201ENST00000362869 119 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
NPAS1Q99742 RNU6-741P-201ENST00000383889 107 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 MIR134-201ENST00000385258 73 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPAS1Q99742 AL139039.1-201ENST00000401900 692 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 FAT1P1-201ENST00000406588 507 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPAS1Q99742 RNU6-908P-201ENST00000410160 94 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 CYCSP19-201ENST00000411715 316 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 AC080125.1-201ENST00000414888 684 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.44□□□□□ -1.86
NPAS1Q99742 RPL7P46-201ENST00000425129 740 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.44□□□□□ -1.86
NPAS1Q99742 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.44□□□□□ -1.86
NPAS1Q99742 AC122718.1-201ENST00000439448 744 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 AL353572.1-201ENST00000442490 417 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 WASF1P1-201ENST00000447560 1131 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 AL118520.1-201ENST00000450770 291 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 FAM133DP-201ENST00000464802 691 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 RPS20P22-201ENST00000473700 357 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.44□□□□□ -1.86
NPAS1Q99742 TRBV12-2-201ENST00000489763 344 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 UBE2CP3-201ENST00000502715 450 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.44□□□□□ -1.86
NPAS1Q99742 SNORA31.3-201ENST00000516029 96 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 RN7SKP219-201ENST00000516825 296 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.44□□□□□ -1.86
NPAS1Q99742 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.44□□□□□ -1.86
NPAS1Q99742 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.44□□□□□ -1.86
NPAS1Q99742 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.44□□□□□ -1.86
NPAS1Q99742 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.44□□□□□ -1.86
NPAS1Q99742 AC098826.3-201ENST00000603823 466 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 SNORA62.6-201ENST00000606322 83 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 AL020991.1-201ENST00000612314 373 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.44□□□□□ -1.86
NPAS1Q99742 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.44□□□□□ -1.86
NPAS1Q99742 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.44□□□□□ -1.86
NPAS1Q99742 AL512643.1-201ENST00000635735 524 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPAS1Q99742 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NPAS1Q99742 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.44□□□□□ -1.86
NPAS1Q99742 ZNF826P-207ENST00000622273 1910 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.44□□□□□ -1.86
NPAS1Q99742 ASNSP3-201ENST00000451989 1306 ntBASIC3.44□□□□□ -1.86
NPAS1Q99742 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NPAS1Q99742 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NPAS1Q99742 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NPAS1Q99742 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.43□□□□□ -1.86
NPAS1Q99742 RNY3P3-201ENST00000363816 102 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NPAS1Q99742 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.43□□□□□ -1.86
NPAS1Q99742 MIR184-201ENST00000384962 84 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 RNU6-903P-201ENST00000391270 109 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 RNU6-876P-201ENST00000391295 104 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 UBE2V1P2-201ENST00000397758 440 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.43□□□□□ -1.86
NPAS1Q99742 AL591034.1-201ENST00000407447 340 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 SNORA3.3-201ENST00000408712 125 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 U3.42-201ENST00000408746 214 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 RN7SKP156-201ENST00000410308 342 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 RN7SKP53-201ENST00000411337 315 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 OR9R1P-201ENST00000412200 877 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.43□□□□□ -1.86
NPAS1Q99742 AL592045.1-201ENST00000429867 352 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 GPM6BP2-201ENST00000432046 144 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.43□□□□□ -1.86
NPAS1Q99742 TAAR7P-201ENST00000436141 242 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.43□□□□□ -1.86
NPAS1Q99742 GPM6BP1-201ENST00000446387 144 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 ELOCP23-201ENST00000452014 332 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 RNA5SP310-201ENST00000459084 116 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 RPL7P5-201ENST00000471472 736 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 EIF4EP3-201ENST00000498782 656 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.43□□□□□ -1.86
NPAS1Q99742 RNU4-29P-201ENST00000515943 174 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 RNA5SP471-201ENST00000516971 106 ntBASIC3.43□□□□□ -1.86
NPAS1Q99742 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms