Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 RPL21P8-201ENST00000465083 535 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 AP000852.1-201ENST00000472460 573 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 RPS29P25-201ENST00000481709 171 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 RPL32P34-201ENST00000486380 400 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 VN1R104P-201ENST00000505115 1009 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.36□□□□□ -1.87
PKP4Q99569 SNORA70.16-201ENST00000516390 95 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 SNORA70.19-201ENST00000516717 90 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 AC103783.1-201ENST00000520506 373 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.36□□□□□ -1.87
PKP4Q99569 SETP2-201ENST00000553886 926 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.36□□□□□ -1.87
PKP4Q99569 AC055876.1-202ENST00000567053 138 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 MIR3167-201ENST00000579623 85 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 MIR4429-201ENST00000580105 73 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.36□□□□□ -1.87
PKP4Q99569 FGF7P1-201ENST00000582820 288 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 NRBF2P5-201ENST00000603087 788 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 AL162413.1-201ENST00000603198 110 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 AC007621.1-201ENST00000604544 437 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 AC008945.2-201ENST00000606056 604 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 Y_RNA.804-201ENST00000615262 101 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 AL138880.2-201ENST00000616214 239 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.36□□□□□ -1.87
PKP4Q99569 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKP4Q99569 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
PKP4Q99569 AL354685.2-201ENST00000448218 1447 ntBASIC3.36□□□□□ -1.87
PKP4Q99569 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PKP4Q99569 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
PKP4Q99569 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.35□□□□□ -1.87
PKP4Q99569 AC103988.1-201ENST00000566382 2177 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 AC032011.1-201ENST00000611703 1549 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 CBX3P1-201ENST00000325243 554 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 RNU4-35P-201ENST00000362588 141 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 RNU6-359P-201ENST00000365466 108 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.35□□□□□ -1.87
PKP4Q99569 SNORA20.2-201ENST00000383922 131 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 RNU6-456P-201ENST00000384493 107 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 U3.20-201ENST00000390909 217 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 SNORD17-201ENST00000390930 237 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 MIR1290-201ENST00000408735 78 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.35□□□□□ -1.87
PKP4Q99569 MTATP6P18-201ENST00000417994 673 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 BX842559.1-201ENST00000419615 532 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 AL353193.1-201ENST00000421444 268 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 HMGN2P31-201ENST00000432430 273 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 MTND4LP16-201ENST00000440828 295 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 USP9YP8-201ENST00000441913 500 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 CALM1P1-201ENST00000442082 433 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 AL590664.1-201ENST00000448065 339 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.35□□□□□ -1.87
PKP4Q99569 RPL23AP14-201ENST00000468281 468 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 AC108860.1-201ENST00000484521 383 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 RPL36AP51-201ENST00000487216 318 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 AC006483.1-201ENST00000487308 313 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 PCBP2P3-201ENST00000509726 843 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.35□□□□□ -1.87
PKP4Q99569 RNU6-507P-201ENST00000516045 100 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.35□□□□□ -1.87
PKP4Q99569 AC107934.1-201ENST00000522215 217 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 AC104383.1-201ENST00000530297 370 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.35□□□□□ -1.87
PKP4Q99569 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.35□□□□□ -1.87
PKP4Q99569 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.35□□□□□ -1.87
PKP4Q99569 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.35□□□□□ -1.87
PKP4Q99569 AC009994.1-201ENST00000606889 253 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 AL391813.2-201ENST00000609113 322 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 AC093788.1-201ENST00000609356 927 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.35□□□□□ -1.87
PKP4Q99569 MIR3662-201ENST00000637030 95 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
PKP4Q99569 AL513302.2-201ENST00000562313 1842 ntBASIC3.35□□□□□ -1.87
PKP4Q99569 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.35□□□□□ -1.87
PKP4Q99569 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.87
PKP4Q99569 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.34□□□□□ -1.87
PKP4Q99569 Y_RNA.11-201ENST00000362375 109 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 RNY1P12-201ENST00000364251 105 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
PKP4Q99569 RNU1-39P-201ENST00000383897 165 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 MIR184-201ENST00000384962 84 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 RPS4XP3-201ENST00000398541 413 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.34□□□□□ -1.87
PKP4Q99569 RPL21P111-201ENST00000418453 477 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.34□□□□□ -1.87
PKP4Q99569 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.34□□□□□ -1.87
PKP4Q99569 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.34□□□□□ -1.87
PKP4Q99569 TRIAP1P1-201ENST00000427062 225 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 UBE2V1P13-201ENST00000436983 439 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 RPL7P54-201ENST00000438336 674 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.34□□□□□ -1.87
PKP4Q99569 MTCO2P29-201ENST00000465212 189 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 AC021382.1-201ENST00000483523 359 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.34□□□□□ -1.87
PKP4Q99569 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.34□□□□□ -1.87
PKP4Q99569 AC026784.1-201ENST00000507986 352 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 AC110768.1-201ENST00000509222 400 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.34□□□□□ -1.87
PKP4Q99569 AC025465.4-201ENST00000513422 638 ntBASIC3.34□□□□□ -1.87
PKP4Q99569 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms