Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NUP88Q99567 RNU6-1287P-201ENST00000362914 107 ntBASIC4.13□□□□□ -1.75
NUP88Q99567 Y_RNA.295-201ENST00000364918 102 ntBASIC4.13□□□□□ -1.75
NUP88Q99567 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.13□□□□□ -1.75
NUP88Q99567 SNORA69-201ENST00000383895 132 ntBASIC4.13□□□□□ -1.75
NUP88Q99567 RNU6-1029P-201ENST00000384109 107 ntBASIC4.13□□□□□ -1.75
NUP88Q99567 RNU6-1060P-201ENST00000384664 107 ntBASIC4.13□□□□□ -1.75
NUP88Q99567 SNORD17-201ENST00000390930 237 ntBASIC4.13□□□□□ -1.75
NUP88Q99567 AL391417.1-201ENST00000404100 426 ntBASIC4.13□□□□□ -1.75
NUP88Q99567 RNA5SP111-201ENST00000411386 101 ntBASIC4.13□□□□□ -1.75
NUP88Q99567 RHEBP3-201ENST00000411920 351 ntBASIC4.13□□□□□ -1.75
NUP88Q99567 AMD1P2-201ENST00000412936 992 ntBASIC4.13□□□□□ -1.75
NUP88Q99567 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.13□□□□□ -1.75
NUP88Q99567 RPL23AP83-201ENST00000434984 473 ntBASIC4.13□□□□□ -1.75
NUP88Q99567 AC016691.1-201ENST00000441321 413 ntBASIC4.13□□□□□ -1.75
NUP88Q99567 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.13□□□□□ -1.75
NUP88Q99567 AL356010.1-201ENST00000456364 102 ntBASIC4.13□□□□□ -1.75
NUP88Q99567 BX510359.1-201ENST00000456973 237 ntBASIC4.13□□□□□ -1.75
NUP88Q99567 U3.44-201ENST00000458938 192 ntBASIC4.13□□□□□ -1.75
NUP88Q99567 RNU6-261P-201ENST00000459506 102 ntBASIC4.13□□□□□ -1.75
NUP88Q99567 AC104806.1-201ENST00000508720 308 ntBASIC4.13□□□□□ -1.75
NUP88Q99567 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.13□□□□□ -1.75
NUP88Q99567 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.13□□□□□ -1.75
NUP88Q99567 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.13□□□□□ -1.75
NUP88Q99567 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.13□□□□□ -1.75
NUP88Q99567 ADI1P3-201ENST00000549509 470 ntBASIC4.13□□□□□ -1.75
NUP88Q99567 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.13□□□□□ -1.75
NUP88Q99567 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.13□□□□□ -1.75
NUP88Q99567 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.13□□□□□ -1.75
NUP88Q99567 AL670379.4-201ENST00000605279 254 ntBASIC4.13□□□□□ -1.75
NUP88Q99567 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.13□□□□□ -1.75
NUP88Q99567 AL356321.1-201ENST00000621360 228 ntBASIC4.13□□□□□ -1.75
NUP88Q99567 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.13□□□□□ -1.75
NUP88Q99567 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NUP88Q99567 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUP88Q99567 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NUP88Q99567 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUP88Q99567 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
NUP88Q99567 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NUP88Q99567 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NUP88Q99567 OTUD4P1-201ENST00000237841 3067 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
NUP88Q99567 NACAP2-201ENST00000318548 624 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 FRG1CP-201ENST00000358464 769 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 RNA5SP267-201ENST00000364893 126 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 RNU6-61P-201ENST00000365528 109 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.12□□□□□ -1.75
NUP88Q99567 BX323014.1-201ENST00000412876 237 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 ZNF90P2-204ENST00000419323 1075 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 YPEL5P1-201ENST00000419731 367 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.12□□□□□ -1.75
NUP88Q99567 MTCYBP8-201ENST00000422855 651 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.12□□□□□ -1.75
NUP88Q99567 AL591212.2-201ENST00000433923 257 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.12□□□□□ -1.75
NUP88Q99567 NFU1P2-201ENST00000448700 469 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 AL162395.1-201ENST00000457882 422 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 MTAPP1-201ENST00000489154 819 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.12□□□□□ -1.75
NUP88Q99567 AC109927.2-201ENST00000506416 303 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.12□□□□□ -1.75
NUP88Q99567 AC105417.1-201ENST00000514691 285 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 SNORA40.12-201ENST00000516329 111 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 Y_RNA.689-201ENST00000516589 107 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 RNA5SP291-201ENST00000517222 105 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.12□□□□□ -1.75
NUP88Q99567 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.12□□□□□ -1.75
NUP88Q99567 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.12□□□□□ -1.75
NUP88Q99567 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.12□□□□□ -1.75
NUP88Q99567 AC024619.4-201ENST00000580924 316 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.12□□□□□ -1.75
NUP88Q99567 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.12□□□□□ -1.75
NUP88Q99567 AC104458.1-201ENST00000608243 463 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 AL365204.3-201ENST00000612448 685 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 AL442067.2-201ENST00000614033 363 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 AL355365.1-201ENST00000616480 294 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 YWHAEP7-203ENST00000622054 312 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 AC073073.2-201ENST00000609827 2578 ntBASIC4.12□□□□□ -1.75
NUP88Q99567 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.12□□□□□ -1.75
NUP88Q99567 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
NUP88Q99567 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.12□□□□□ -1.75
NUP88Q99567 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUP88Q99567 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NUP88Q99567 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NUP88Q99567 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.11□□□□□ -1.75
NUP88Q99567 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NUP88Q99567 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.11□□□□□ -1.75
NUP88Q99567 RNU1-33P-201ENST00000364249 162 ntBASIC4.11□□□□□ -1.75
NUP88Q99567 AL138878.1-201ENST00000405131 347 ntBASIC4.11□□□□□ -1.75
NUP88Q99567 MTHFD2P2-201ENST00000407725 247 ntBASIC4.11□□□□□ -1.75
NUP88Q99567 USP9YP6-201ENST00000413550 854 ntBASIC4.11□□□□□ -1.75
NUP88Q99567 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.11□□□□□ -1.75
NUP88Q99567 NDUFB4P7-201ENST00000423198 363 ntBASIC4.11□□□□□ -1.75
NUP88Q99567 AC091390.3-201ENST00000426478 338 ntBASIC4.11□□□□□ -1.75
NUP88Q99567 AC017083.1-201ENST00000428093 483 ntBASIC4.11□□□□□ -1.75
NUP88Q99567 MTND1P2-201ENST00000430604 821 ntBASIC4.11□□□□□ -1.75
NUP88Q99567 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.11□□□□□ -1.75
NUP88Q99567 CBWD4P-201ENST00000445695 655 ntBASIC4.11□□□□□ -1.75
NUP88Q99567 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.11□□□□□ -1.75
NUP88Q99567 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 591.3 ms