Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 RPL26P9-201ENST00000457466 433 ntBASIC2.03□□□□□ -2.08
VAT1Q99536 AC079804.2-201ENST00000490376 200 ntBASIC2.03□□□□□ -2.08
VAT1Q99536 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
VAT1Q99536 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.03□□□□□ -2.08
VAT1Q99536 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.03□□□□□ -2.08
VAT1Q99536 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.03□□□□□ -2.08
VAT1Q99536 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.03□□□□□ -2.08
VAT1Q99536 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.03□□□□□ -2.08
VAT1Q99536 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.03□□□□□ -2.08
VAT1Q99536 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.03□□□□□ -2.08
VAT1Q99536 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.03□□□□□ -2.08
VAT1Q99536 AC024257.5-201ENST00000612739 531 ntBASIC2.03□□□□□ -2.08
VAT1Q99536 AC009090.3-201ENST00000616553 565 ntBASIC2.03□□□□□ -2.08
VAT1Q99536 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.03□□□□□ -2.08
VAT1Q99536 AL138713.1-201ENST00000624026 2130 ntBASIC2.03□□□□□ -2.08
VAT1Q99536 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.03□□□□□ -2.08
VAT1Q99536 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.02□□□□□ -2.09
VAT1Q99536 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VAT1Q99536 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
VAT1Q99536 MTND4P27-201ENST00000450813 1354 ntBASIC2.02□□□□□ -2.09
VAT1Q99536 HSPE1P11-201ENST00000339579 310 ntBASIC2.02□□□□□ -2.09
VAT1Q99536 RNU4-52P-201ENST00000384209 138 ntBASIC2.02□□□□□ -2.09
VAT1Q99536 RSL24D1P4-201ENST00000400938 484 ntBASIC2.02□□□□□ -2.09
VAT1Q99536 MIR888-201ENST00000401186 77 ntBASIC2.02□□□□□ -2.09
VAT1Q99536 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.02□□□□□ -2.09
VAT1Q99536 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.02□□□□□ -2.09
VAT1Q99536 HMGB1P49-201ENST00000418882 569 ntBASIC2.02□□□□□ -2.09
VAT1Q99536 SEPT2P1-201ENST00000419651 180 ntBASIC2.02□□□□□ -2.09
VAT1Q99536 MRPS36P1-201ENST00000421291 307 ntBASIC2.02□□□□□ -2.09
VAT1Q99536 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.02□□□□□ -2.09
VAT1Q99536 Z98742.2-201ENST00000431564 187 ntBASIC2.02□□□□□ -2.09
VAT1Q99536 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
VAT1Q99536 ARPC3P5-201ENST00000448802 534 ntBASIC2.02□□□□□ -2.09
VAT1Q99536 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VAT1Q99536 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VAT1Q99536 AC098591.2-201ENST00000510152 315 ntBASIC2.02□□□□□ -2.09
VAT1Q99536 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.02□□□□□ -2.09
VAT1Q99536 FAM92A1P1-201ENST00000528023 890 ntBASIC2.02□□□□□ -2.09
VAT1Q99536 AP003497.1-201ENST00000528472 562 ntBASIC2.02□□□□□ -2.09
VAT1Q99536 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.02□□□□□ -2.09
VAT1Q99536 AC104072.1-201ENST00000568817 668 ntBASIC2.02□□□□□ -2.09
VAT1Q99536 MIR5089-201ENST00000580047 84 ntBASIC2.02□□□□□ -2.09
VAT1Q99536 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.02□□□□□ -2.09
VAT1Q99536 MTATP6P2-201ENST00000603319 678 ntBASIC2.02□□□□□ -2.09
VAT1Q99536 AP000403.1-201ENST00000603349 851 ntBASIC2.02□□□□□ -2.09
VAT1Q99536 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
VAT1Q99536 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
VAT1Q99536 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.02□□□□□ -2.09
VAT1Q99536 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.02□□□□□ -2.09
VAT1Q99536 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
VAT1Q99536 AC010329.5-201ENST00000623497 2174 ntBASIC2.01□□□□□ -2.09
VAT1Q99536 Y_RNA.110-201ENST00000363220 99 ntBASIC2.01□□□□□ -2.09
VAT1Q99536 RNA5SP138-201ENST00000365098 114 ntBASIC2.01□□□□□ -2.09
VAT1Q99536 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
VAT1Q99536 SNORA67.3-201ENST00000384366 140 ntBASIC2.01□□□□□ -2.09
VAT1Q99536 AL355497.1-201ENST00000406262 551 ntBASIC2.01□□□□□ -2.09
VAT1Q99536 RNA5SP338-201ENST00000410495 85 ntBASIC2.01□□□□□ -2.09
VAT1Q99536 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VAT1Q99536 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.01□□□□□ -2.09
VAT1Q99536 AL451054.2-201ENST00000420896 202 ntBASIC2.01□□□□□ -2.09
VAT1Q99536 SRIP2-201ENST00000428470 166 ntBASIC2.01□□□□□ -2.09
VAT1Q99536 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.01□□□□□ -2.09
VAT1Q99536 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VAT1Q99536 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.01□□□□□ -2.09
VAT1Q99536 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.01□□□□□ -2.09
VAT1Q99536 AC090515.1-201ENST00000465295 476 ntBASIC2.01□□□□□ -2.09
VAT1Q99536 AC108734.3-201ENST00000481241 1165 ntBASIC2.01□□□□□ -2.09
VAT1Q99536 AC118465.1-201ENST00000513820 1271 ntBASIC2.01□□□□□ -2.09
VAT1Q99536 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.01□□□□□ -2.09
VAT1Q99536 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.01□□□□□ -2.09
VAT1Q99536 AC087894.1-201ENST00000538359 518 ntBASIC2.01□□□□□ -2.09
VAT1Q99536 AL136520.1-202ENST00000555494 763 ntBASIC2.01□□□□□ -2.09
VAT1Q99536 AGGF1P5-201ENST00000567900 919 ntBASIC2.01□□□□□ -2.09
VAT1Q99536 AC008507.2-201ENST00000588402 1176 ntBASIC2.01□□□□□ -2.09
VAT1Q99536 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.01□□□□□ -2.09
VAT1Q99536 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.01□□□□□ -2.09
VAT1Q99536 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VAT1Q99536 Y_RNA.783-201ENST00000613546 102 ntBASIC2.01□□□□□ -2.09
VAT1Q99536 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.01□□□□□ -2.09
VAT1Q99536 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.01□□□□□ -2.09
VAT1Q99536 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VAT1Q99536 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VAT1Q99536 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
VAT1Q99536 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VAT1Q99536 snoZ40.1-201ENST00000364540 72 ntBASIC2□□□□□ -2.09
VAT1Q99536 USP9YP21-201ENST00000420603 432 ntBASIC2□□□□□ -2.09
VAT1Q99536 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2□□□□□ -2.09
VAT1Q99536 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2□□□□□ -2.09
VAT1Q99536 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2□□□□□ -2.09
VAT1Q99536 OSTCP8-201ENST00000445117 448 ntBASIC2□□□□□ -2.09
VAT1Q99536 AL121769.1-201ENST00000469473 401 ntBASIC2□□□□□ -2.09
VAT1Q99536 AC022447.1-201ENST00000515358 464 ntBASIC2□□□□□ -2.09
VAT1Q99536 RNU6-1028P-201ENST00000517164 93 ntBASIC2□□□□□ -2.09
VAT1Q99536 AL359212.1-201ENST00000556608 614 ntBASIC2□□□□□ -2.09
VAT1Q99536 BBIP1P1-201ENST00000602999 279 ntBASIC2□□□□□ -2.09
VAT1Q99536 AC021749.1-201ENST00000604322 607 ntBASIC2□□□□□ -2.09
VAT1Q99536 AL139344.1-201ENST00000605228 195 ntBASIC2□□□□□ -2.09
VAT1Q99536 AP002802.2-201ENST00000605877 235 ntBASIC2□□□□□ -2.09
VAT1Q99536 AC005332.10-201ENST00000612725 619 ntBASIC2□□□□□ -2.09
VAT1Q99536 AC010133.1-201ENST00000615809 842 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms