Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AL009028.1-201ENST00000604895 802 ntBASIC1.72□□□□□ -2.13
IFT140Q96RY7 AC107214.2-201ENST00000608204 634 ntBASIC1.72□□□□□ -2.13
IFT140Q96RY7 MIR6857-201ENST00000613267 93 ntBASIC1.72□□□□□ -2.13
IFT140Q96RY7 AC095031.1-201ENST00000623685 672 ntBASIC1.72□□□□□ -2.13
IFT140Q96RY7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
IFT140Q96RY7 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
IFT140Q96RY7 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
IFT140Q96RY7 OR1L1-202ENST00000373686 1083 ntBASIC1.71□□□□□ -2.14
IFT140Q96RY7 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
IFT140Q96RY7 AL591704.2-201ENST00000421658 181 ntBASIC1.71□□□□□ -2.14
IFT140Q96RY7 CBX3P6-201ENST00000430257 527 ntBASIC1.71□□□□□ -2.14
IFT140Q96RY7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.71□□□□□ -2.14
IFT140Q96RY7 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC1.71□□□□□ -2.14
IFT140Q96RY7 AC078857.1-201ENST00000469870 667 ntBASIC1.71□□□□□ -2.14
IFT140Q96RY7 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
IFT140Q96RY7 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.71□□□□□ -2.14
IFT140Q96RY7 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.71□□□□□ -2.14
IFT140Q96RY7 AC022662.1-201ENST00000580252 331 ntBASIC1.71□□□□□ -2.14
IFT140Q96RY7 UBE2L4-201ENST00000587688 464 ntBASIC1.71□□□□□ -2.14
IFT140Q96RY7 SDR42E1P2-201ENST00000614861 481 ntBASIC1.71□□□□□ -2.14
IFT140Q96RY7 AC092140.2-201ENST00000618027 521 ntBASIC1.71□□□□□ -2.14
IFT140Q96RY7 SDR42E1P4-201ENST00000620894 481 ntBASIC1.71□□□□□ -2.14
IFT140Q96RY7 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
IFT140Q96RY7 SNORA38-201ENST00000363946 132 ntBASIC1.7□□□□□ -2.14
IFT140Q96RY7 AC007560.1-201ENST00000426912 237 ntBASIC1.7□□□□□ -2.14
IFT140Q96RY7 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.7□□□□□ -2.14
IFT140Q96RY7 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.7□□□□□ -2.14
IFT140Q96RY7 NEFMP1-201ENST00000443423 1006 ntBASIC1.7□□□□□ -2.14
IFT140Q96RY7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.7□□□□□ -2.14
IFT140Q96RY7 AC020699.1-201ENST00000505161 445 ntBASIC1.7□□□□□ -2.14
IFT140Q96RY7 OR10V3P-201ENST00000525712 725 ntBASIC1.7□□□□□ -2.14
IFT140Q96RY7 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.7□□□□□ -2.14
IFT140Q96RY7 AC004908.2-201ENST00000609090 574 ntBASIC1.7□□□□□ -2.14
IFT140Q96RY7 AP005137.2-201ENST00000609238 400 ntBASIC1.7□□□□□ -2.14
IFT140Q96RY7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
IFT140Q96RY7 MFSD8-213ENST00000641134 1327 ntBASIC1.7□□□□□ -2.14
IFT140Q96RY7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
IFT140Q96RY7 Y_RNA.251-201ENST00000364551 99 ntBASIC1.69□□□□□ -2.14
IFT140Q96RY7 RNU6-516P-201ENST00000411381 104 ntBASIC1.69□□□□□ -2.14
IFT140Q96RY7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.69□□□□□ -2.14
IFT140Q96RY7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.69□□□□□ -2.14
IFT140Q96RY7 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.69□□□□□ -2.14
IFT140Q96RY7 TPTE2P6-202ENST00000445572 1007 ntBASIC1.69□□□□□ -2.14
IFT140Q96RY7 RNU6-1004P-201ENST00000516584 111 ntBASIC1.69□□□□□ -2.14
IFT140Q96RY7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
IFT140Q96RY7 AL136363.1-201ENST00000605349 337 ntBASIC1.69□□□□□ -2.14
IFT140Q96RY7 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
IFT140Q96RY7 AC007742.2-201ENST00000618226 398 ntBASIC1.69□□□□□ -2.14
IFT140Q96RY7 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.69□□□□□ -2.14
IFT140Q96RY7 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
IFT140Q96RY7 MIR676-201ENST00000390702 67 ntBASIC1.69□□□□□ -2.14
IFT140Q96RY7 RPL21P32-201ENST00000419877 477 ntBASIC1.69□□□□□ -2.14
IFT140Q96RY7 AL590233.1-201ENST00000430017 456 ntBASIC1.69□□□□□ -2.14
IFT140Q96RY7 AC097493.1-201ENST00000463958 372 ntBASIC1.69□□□□□ -2.14
IFT140Q96RY7 AP001960.1-201ENST00000506494 658 ntBASIC1.69□□□□□ -2.14
IFT140Q96RY7 AP005597.4-201ENST00000526762 229 ntBASIC1.69□□□□□ -2.14
IFT140Q96RY7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.69□□□□□ -2.14
IFT140Q96RY7 AC105245.1-201ENST00000581934 244 ntBASIC1.69□□□□□ -2.14
IFT140Q96RY7 SNORD114-21-201ENST00000606412 72 ntBASIC1.69□□□□□ -2.14
IFT140Q96RY7 AL627230.6-201ENST00000611129 280 ntBASIC1.69□□□□□ -2.14
IFT140Q96RY7 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.69□□□□□ -2.14
IFT140Q96RY7 MIR7974-201ENST00000615835 79 ntBASIC1.69□□□□□ -2.14
IFT140Q96RY7 AL138880.2-201ENST00000616214 239 ntBASIC1.69□□□□□ -2.14
IFT140Q96RY7 AC097655.1-201ENST00000635075 318 ntBASIC1.69□□□□□ -2.14
IFT140Q96RY7 MTND4P31-201ENST00000425607 1343 ntBASIC1.68□□□□□ -2.14
IFT140Q96RY7 SNORA62.1-201ENST00000364287 154 ntBASIC1.68□□□□□ -2.14
IFT140Q96RY7 RNU6-185P-201ENST00000384421 107 ntBASIC1.68□□□□□ -2.14
IFT140Q96RY7 RNU6-837P-201ENST00000391056 108 ntBASIC1.68□□□□□ -2.14
IFT140Q96RY7 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC1.68□□□□□ -2.14
IFT140Q96RY7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.68□□□□□ -2.14
IFT140Q96RY7 GDI2P2-201ENST00000445131 608 ntBASIC1.68□□□□□ -2.14
IFT140Q96RY7 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.68□□□□□ -2.14
IFT140Q96RY7 AC016065.2-201ENST00000514530 444 ntBASIC1.68□□□□□ -2.14
IFT140Q96RY7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.68□□□□□ -2.14
IFT140Q96RY7 MIR1273G-201ENST00000577677 100 ntBASIC1.68□□□□□ -2.14
IFT140Q96RY7 RPS4XP3-201ENST00000398541 413 ntBASIC1.67□□□□□ -2.14
IFT140Q96RY7 MTCO3P4-201ENST00000419236 787 ntBASIC1.67□□□□□ -2.14
IFT140Q96RY7 AL121601.2-201ENST00000438019 707 ntBASIC1.67□□□□□ -2.14
IFT140Q96RY7 BTF3P12-201ENST00000519620 469 ntBASIC1.67□□□□□ -2.14
IFT140Q96RY7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.67□□□□□ -2.14
IFT140Q96RY7 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.67□□□□□ -2.14
IFT140Q96RY7 AC090616.3-201ENST00000582184 217 ntBASIC1.67□□□□□ -2.14
IFT140Q96RY7 AC005332.10-201ENST00000612725 619 ntBASIC1.67□□□□□ -2.14
IFT140Q96RY7 AC110079.1-202ENST00000635213 138 ntBASIC1.67□□□□□ -2.14
IFT140Q96RY7 AC068620.4-201ENST00000636730 1182 ntBASIC1.67□□□□□ -2.14
IFT140Q96RY7 NDUFA5P10-201ENST00000432147 357 ntBASIC1.66□□□□□ -2.14
IFT140Q96RY7 AC133963.2-201ENST00000513686 578 ntBASIC1.66□□□□□ -2.14
IFT140Q96RY7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.66□□□□□ -2.14
IFT140Q96RY7 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.66□□□□□ -2.14
IFT140Q96RY7 ZNF92P3-201ENST00000596594 954 ntBASIC1.66□□□□□ -2.14
IFT140Q96RY7 AL590095.2-201ENST00000604136 117 ntBASIC1.66□□□□□ -2.14
IFT140Q96RY7 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.66□□□□□ -2.14
IFT140Q96RY7 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
IFT140Q96RY7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.66□□□□□ -2.14
IFT140Q96RY7 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.65□□□□□ -2.14
IFT140Q96RY7 RBBP8P1-201ENST00000449447 1844 ntBASIC1.65□□□□□ -2.14
IFT140Q96RY7 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.65□□□□□ -2.15
IFT140Q96RY7 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
IFT140Q96RY7 MTCYBP34-201ENST00000439552 670 ntBASIC1.65□□□□□ -2.15
IFT140Q96RY7 AL627224.1-201ENST00000448334 444 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms