Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SYNGAP1Q96PV0 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
SYNGAP1Q96PV0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SYNGAP1Q96PV0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SYNGAP1Q96PV0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SYNGAP1Q96PV0 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5□□□□□ -1.61
SYNGAP1Q96PV0 RNU6-339P-201ENST00000384310 107 ntBASIC5□□□□□ -1.61
SYNGAP1Q96PV0 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SYNGAP1Q96PV0 AC092447.6-201ENST00000414578 210 ntBASIC5□□□□□ -1.61
SYNGAP1Q96PV0 RPS23P10-201ENST00000416185 486 ntBASIC5□□□□□ -1.61
SYNGAP1Q96PV0 AC099677.1-201ENST00000420575 175 ntBASIC5□□□□□ -1.61
SYNGAP1Q96PV0 CEACAMP1-201ENST00000434624 1035 ntBASIC5□□□□□ -1.61
SYNGAP1Q96PV0 CYCSP43-201ENST00000438233 310 ntBASIC5□□□□□ -1.61
SYNGAP1Q96PV0 RPL23AP52-201ENST00000439311 478 ntBASIC5□□□□□ -1.61
SYNGAP1Q96PV0 NEFMP1-201ENST00000443423 1006 ntBASIC5□□□□□ -1.61
SYNGAP1Q96PV0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5□□□□□ -1.61
SYNGAP1Q96PV0 AL162389.1-201ENST00000449233 177 ntBASIC5□□□□□ -1.61
SYNGAP1Q96PV0 AC084198.1-201ENST00000477747 402 ntBASIC5□□□□□ -1.61
SYNGAP1Q96PV0 RN7SL691P-201ENST00000494487 301 ntBASIC5□□□□□ -1.61
SYNGAP1Q96PV0 AC009901.1-201ENST00000506703 541 ntBASIC5□□□□□ -1.61
SYNGAP1Q96PV0 AC008958.1-201ENST00000511047 682 ntBASIC5□□□□□ -1.61
SYNGAP1Q96PV0 RNA5SP497-201ENST00000516081 97 ntBASIC5□□□□□ -1.61
SYNGAP1Q96PV0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5□□□□□ -1.61
SYNGAP1Q96PV0 AC131281.1-201ENST00000522984 164 ntBASIC5□□□□□ -1.61
SYNGAP1Q96PV0 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5□□□□□ -1.61
SYNGAP1Q96PV0 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5□□□□□ -1.61
SYNGAP1Q96PV0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5□□□□□ -1.61
SYNGAP1Q96PV0 RPL21P7-201ENST00000557463 483 ntBASIC5□□□□□ -1.61
SYNGAP1Q96PV0 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5□□□□□ -1.61
SYNGAP1Q96PV0 AC005899.2-201ENST00000584353 90 ntBASIC5□□□□□ -1.61
SYNGAP1Q96PV0 AL034351.1-201ENST00000605288 668 ntBASIC5□□□□□ -1.61
SYNGAP1Q96PV0 AL359547.2-201ENST00000615810 418 ntBASIC5□□□□□ -1.61
SYNGAP1Q96PV0 AC005086.4-201ENST00000623065 213 ntBASIC5□□□□□ -1.61
SYNGAP1Q96PV0 AC092435.4-201ENST00000623012 4159 ntBASIC5□□□□□ -1.61
SYNGAP1Q96PV0 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5□□□□□ -1.61
SYNGAP1Q96PV0 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5□□□□□ -1.61
SYNGAP1Q96PV0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
SYNGAP1Q96PV0 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
SYNGAP1Q96PV0 AC009229.4-201ENST00000623854 1947 ntBASIC5□□□□□ -1.61
SYNGAP1Q96PV0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5□□□□□ -1.61
SYNGAP1Q96PV0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
SYNGAP1Q96PV0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 AC138393.1-203ENST00000327086 343 ntBASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 Y_RNA.396-201ENST00000383949 103 ntBASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 RNU4-70P-201ENST00000384579 139 ntBASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 EIF4A1P3-201ENST00000411521 244 ntBASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 Z92545.1-201ENST00000411782 234 ntBASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 AC092809.3-201ENST00000415453 231 ntBASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 MRPS18CP6-201ENST00000423587 223 ntBASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 SUMO1P3-201ENST00000439961 304 ntBASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 AL359672.1-201ENST00000442302 409 ntBASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 OSTCP8-201ENST00000445117 448 ntBASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 RPL9P32-201ENST00000464118 620 ntBASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 DEFB109F-201ENST00000491870 277 ntBASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 AC078899.3-201ENST00000599065 212 ntBASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 SNX18P1Y-201ENST00000616231 511 ntBASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 NEAT1-202ENST00000501122 22743 ntBASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 AC139769.1-204ENST00000472297 1931 ntBASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 AL672167.1-203ENST00000641299 2975 ntBASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 BTBD10P1-201ENST00000549824 1352 ntBASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SYNGAP1Q96PV0 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 SPRR2C-201ENST00000290702 219 ntBASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 RNU4-44P-201ENST00000363050 141 ntBASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 RNA5SP151-201ENST00000365632 117 ntBASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 RNU6ATAC-201ENST00000408749 126 ntBASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 RPL31P2-201ENST00000413849 377 ntBASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 AC099336.2-201ENST00000422457 254 ntBASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 PSMA2P3-201ENST00000429685 675 ntBASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 RPS24P6-201ENST00000452670 400 ntBASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 AC099560.2-201ENST00000457554 255 ntBASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 SNORD5.1-201ENST00000458800 75 ntBASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 AC010683.1-201ENST00000473673 378 ntBASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 AC087385.1-201ENST00000475062 312 ntBASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 RNA5SP446-201ENST00000515955 82 ntBASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 Y_RNA.668-201ENST00000516233 93 ntBASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 CYCSP27-201ENST00000527643 293 ntBASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.98□□□□□ -1.61
SYNGAP1Q96PV0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 151 ms