Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MTCO1P17-201ENST00000411522 491 ntBASIC2.5□□□□□ -2.01
RPRD1AQ96P16 AC023141.4-201ENST00000412031 328 ntBASIC2.5□□□□□ -2.01
RPRD1AQ96P16 TXNL1P1-201ENST00000429528 554 ntBASIC2.5□□□□□ -2.01
RPRD1AQ96P16 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.5□□□□□ -2.01
RPRD1AQ96P16 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.5□□□□□ -2.01
RPRD1AQ96P16 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.5□□□□□ -2.01
RPRD1AQ96P16 MTCO3P45-201ENST00000443036 613 ntBASIC2.5□□□□□ -2.01
RPRD1AQ96P16 DPPA3P1-201ENST00000448050 469 ntBASIC2.5□□□□□ -2.01
RPRD1AQ96P16 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.5□□□□□ -2.01
RPRD1AQ96P16 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.5□□□□□ -2.01
RPRD1AQ96P16 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.5□□□□□ -2.01
RPRD1AQ96P16 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.5□□□□□ -2.01
RPRD1AQ96P16 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.5□□□□□ -2.01
RPRD1AQ96P16 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.5□□□□□ -2.01
RPRD1AQ96P16 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.5□□□□□ -2.01
RPRD1AQ96P16 RNA5SP402-201ENST00000517148 110 ntBASIC2.5□□□□□ -2.01
RPRD1AQ96P16 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.5□□□□□ -2.01
RPRD1AQ96P16 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.5□□□□□ -2.01
RPRD1AQ96P16 ATP5F1P5-201ENST00000526403 760 ntBASIC2.5□□□□□ -2.01
RPRD1AQ96P16 MIR4509-3-201ENST00000578671 94 ntBASIC2.5□□□□□ -2.01
RPRD1AQ96P16 MIR4509-2-201ENST00000583920 94 ntBASIC2.5□□□□□ -2.01
RPRD1AQ96P16 MIR3117-201ENST00000584034 78 ntBASIC2.5□□□□□ -2.01
RPRD1AQ96P16 AC021171.1-201ENST00000603137 706 ntBASIC2.5□□□□□ -2.01
RPRD1AQ96P16 MIR4509-1-201ENST00000618224 94 ntBASIC2.5□□□□□ -2.01
RPRD1AQ96P16 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.5□□□□□ -2.01
RPRD1AQ96P16 PCMTD1P7-201ENST00000634506 357 ntBASIC2.5□□□□□ -2.01
RPRD1AQ96P16 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.5□□□□□ -2.01
RPRD1AQ96P16 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RPRD1AQ96P16 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
RPRD1AQ96P16 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.5□□□□□ -2.01
RPRD1AQ96P16 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RPRD1AQ96P16 AC080100.1-201ENST00000624239 5356 ntBASIC2.49□□□□□ -2.01
RPRD1AQ96P16 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.49□□□□□ -2.01
RPRD1AQ96P16 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
RPRD1AQ96P16 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RPRD1AQ96P16 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.49□□□□□ -2.01
RPRD1AQ96P16 RNU6-223P-201ENST00000362830 107 ntBASIC2.49□□□□□ -2.01
RPRD1AQ96P16 SNORA41-201ENST00000384675 132 ntBASIC2.49□□□□□ -2.01
RPRD1AQ96P16 RNU2-49P-201ENST00000410666 184 ntBASIC2.49□□□□□ -2.01
RPRD1AQ96P16 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.49□□□□□ -2.01
RPRD1AQ96P16 NANOGP5-201ENST00000424456 877 ntBASIC2.49□□□□□ -2.01
RPRD1AQ96P16 AC092648.1-201ENST00000425870 423 ntBASIC2.49□□□□□ -2.01
RPRD1AQ96P16 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.49□□□□□ -2.01
RPRD1AQ96P16 RPS12P2-201ENST00000439728 269 ntBASIC2.49□□□□□ -2.01
RPRD1AQ96P16 MTATP6P30-201ENST00000443540 664 ntBASIC2.49□□□□□ -2.01
RPRD1AQ96P16 EEF1B2P7-201ENST00000451177 676 ntBASIC2.49□□□□□ -2.01
RPRD1AQ96P16 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.49□□□□□ -2.01
RPRD1AQ96P16 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.49□□□□□ -2.01
RPRD1AQ96P16 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.49□□□□□ -2.01
RPRD1AQ96P16 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.49□□□□□ -2.01
RPRD1AQ96P16 RPL7P18-201ENST00000478965 734 ntBASIC2.49□□□□□ -2.01
RPRD1AQ96P16 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.49□□□□□ -2.01
RPRD1AQ96P16 AC104090.1-201ENST00000506341 1171 ntBASIC2.49□□□□□ -2.01
RPRD1AQ96P16 AC234781.5-201ENST00000508429 271 ntBASIC2.49□□□□□ -2.01
RPRD1AQ96P16 AC118465.1-201ENST00000513820 1271 ntBASIC2.49□□□□□ -2.01
RPRD1AQ96P16 AC021269.2-201ENST00000532318 330 ntBASIC2.49□□□□□ -2.01
RPRD1AQ96P16 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.49□□□□□ -2.01
RPRD1AQ96P16 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.49□□□□□ -2.01
RPRD1AQ96P16 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.49□□□□□ -2.01
RPRD1AQ96P16 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.49□□□□□ -2.01
RPRD1AQ96P16 MIR5694-201ENST00000581190 76 ntBASIC2.49□□□□□ -2.01
RPRD1AQ96P16 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.49□□□□□ -2.01
RPRD1AQ96P16 AC112220.3-201ENST00000605502 502 ntBASIC2.49□□□□□ -2.01
RPRD1AQ96P16 AC005014.3-201ENST00000605985 190 ntBASIC2.49□□□□□ -2.01
RPRD1AQ96P16 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.49□□□□□ -2.01
RPRD1AQ96P16 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
RPRD1AQ96P16 AC069528.2-201ENST00000624849 1991 ntBASIC2.49□□□□□ -2.01
RPRD1AQ96P16 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.48□□□□□ -2.01
RPRD1AQ96P16 MTND5P33-201ENST00000571250 1450 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RPRD1AQ96P16 AL139276.1-201ENST00000311910 1001 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.48□□□□□ -2.01
RPRD1AQ96P16 DEFA7P-201ENST00000382676 285 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 RNU6-1072P-201ENST00000384703 107 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 SNORA80E-201ENST00000384744 137 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 RNU6-443P-201ENST00000384780 107 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 MIR888-201ENST00000401186 77 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 MIR320C1-201ENST00000408566 88 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.48□□□□□ -2.01
RPRD1AQ96P16 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.48□□□□□ -2.01
RPRD1AQ96P16 AC083875.1-201ENST00000419509 405 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 AC010153.1-201ENST00000432862 727 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.48□□□□□ -2.01
RPRD1AQ96P16 RPS15AP5-201ENST00000436276 388 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.48□□□□□ -2.01
RPRD1AQ96P16 COX6CP12-201ENST00000446748 202 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.48□□□□□ -2.01
RPRD1AQ96P16 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.48□□□□□ -2.01
RPRD1AQ96P16 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.48□□□□□ -2.01
RPRD1AQ96P16 RPL26P9-201ENST00000457466 433 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 AC008481.1-201ENST00000463278 396 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 MRPL42P6-201ENST00000486397 371 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 AC034222.1-201ENST00000494052 532 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RPRD1AQ96P16 RN7SL636P-201ENST00000497504 294 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 MTND3P3-201ENST00000505004 126 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 AC093809.1-201ENST00000509155 340 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 NDUFB4P2-201ENST00000509515 391 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 AC093281.2-201ENST00000510153 597 ntBASIC2.48□□□□□ -2.01
RPRD1AQ96P16 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms