Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AC027575.1-201ENST00000481064 460 ntBASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 AF213884.2-201ENST00000510417 903 ntBASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 RNU6-276P-201ENST00000516114 96 ntBASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 SNORA19.3-201ENST00000516165 130 ntBASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 RNU6-528P-201ENST00000516926 100 ntBASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 AC008121.1-201ENST00000603244 268 ntBASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 AL589743.7-201ENST00000612637 233 ntBASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 AL590099.1-201ENST00000615276 138 ntBASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 AL357080.1-201ENST00000617394 239 ntBASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 AP000720.1-201ENST00000625091 483 ntBASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.52□□□□□ -2.01
PKNOX2Q96KN3 UBE2D3P1-201ENST00000436669 444 ntBASIC2.51□□□□□ -2.01
PKNOX2Q96KN3 RPS24P13-201ENST00000442520 397 ntBASIC2.51□□□□□ -2.01
PKNOX2Q96KN3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.51□□□□□ -2.01
PKNOX2Q96KN3 RPL26P9-201ENST00000457466 433 ntBASIC2.51□□□□□ -2.01
PKNOX2Q96KN3 RNU7-136P-201ENST00000458819 69 ntBASIC2.51□□□□□ -2.01
PKNOX2Q96KN3 AC104982.1-201ENST00000478775 574 ntBASIC2.51□□□□□ -2.01
PKNOX2Q96KN3 AC004263.1-201ENST00000479327 332 ntBASIC2.51□□□□□ -2.01
PKNOX2Q96KN3 AC140059.1-201ENST00000489238 361 ntBASIC2.51□□□□□ -2.01
PKNOX2Q96KN3 AC026427.2-201ENST00000506228 536 ntBASIC2.51□□□□□ -2.01
PKNOX2Q96KN3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.51□□□□□ -2.01
PKNOX2Q96KN3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.51□□□□□ -2.01
PKNOX2Q96KN3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.51□□□□□ -2.01
PKNOX2Q96KN3 AP001429.1-201ENST00000602568 530 ntBASIC2.51□□□□□ -2.01
PKNOX2Q96KN3 AP000403.1-201ENST00000603349 851 ntBASIC2.51□□□□□ -2.01
PKNOX2Q96KN3 AC011451.2-201ENST00000604303 598 ntBASIC2.51□□□□□ -2.01
PKNOX2Q96KN3 AL773524.1-201ENST00000614065 229 ntBASIC2.51□□□□□ -2.01
PKNOX2Q96KN3 AC002550.2-201ENST00000621246 394 ntBASIC2.51□□□□□ -2.01
PKNOX2Q96KN3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PKNOX2Q96KN3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 RNU6-234P-201ENST00000365229 104 ntBASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 Y_RNA.548-201ENST00000384656 105 ntBASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 MIR218-1-201ENST00000384999 110 ntBASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 RNA5SP171-201ENST00000391071 115 ntBASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 EDDM3CP-201ENST00000415977 425 ntBASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 AL445685.2-201ENST00000422551 342 ntBASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 AC018630.2-202ENST00000422992 927 ntBASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 BX276092.3-201ENST00000424182 230 ntBASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 ZNF863P-201ENST00000426746 417 ntBASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 MTCO2P25-201ENST00000447065 681 ntBASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 AC008837.2-201ENST00000513076 418 ntBASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 AP005639.2-201ENST00000527592 928 ntBASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 AC105245.1-201ENST00000581934 244 ntBASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 AC007349.4-201ENST00000608114 532 ntBASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 AC018645.2-201ENST00000609151 472 ntBASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 AL121895.2-201ENST00000619558 447 ntBASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 AL445264.1-201ENST00000621719 171 ntBASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 AC013437.2-201ENST00000639587 677 ntBASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 LINC02211-204ENST00000642024 1070 ntBASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
PKNOX2Q96KN3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 SNORD62.1-201ENST00000362541 86 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 Y_RNA.234-201ENST00000364409 97 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 RNU6-343P-201ENST00000364709 104 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 RNU6-952P-201ENST00000391164 108 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 TIMM9P2-201ENST00000419324 266 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 PGBD4P6-201ENST00000421501 610 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 MED14P1-201ENST00000430517 648 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 RPL23AP76-201ENST00000441860 458 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 MTND2P24-201ENST00000453434 806 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 snoU13.8-201ENST00000458890 104 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 RPL31P50-201ENST00000471002 296 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 AC096725.1-201ENST00000514266 313 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 RNY4P37-201ENST00000516225 96 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 RNU6-1256P-201ENST00000516539 103 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 AC091163.3-201ENST00000518269 1144 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 AC022880.1-201ENST00000534017 973 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 CBX3P4-201ENST00000538909 354 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 AC022080.3-201ENST00000544433 482 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 DEFB122-202ENST00000569013 197 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 BNIP3P26-201ENST00000600827 554 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 AC004067.1-201ENST00000608733 700 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 PART1_2.1-201ENST00000612397 250 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 AL138960.2-201ENST00000625145 535 ntBASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
PKNOX2Q96KN3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms