Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 OR4G2P-202ENST00000641004 1759 ntBASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 RNY3P3-201ENST00000363816 102 ntBASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 Y_RNA.255-201ENST00000364581 97 ntBASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 AL359837.1-201ENST00000381357 287 ntBASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 MIR554-201ENST00000384874 96 ntBASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 AL391417.1-201ENST00000404100 426 ntBASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 NEFMP1-201ENST00000443423 1006 ntBASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 MTND1P18-201ENST00000448191 573 ntBASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 RPS20P20-201ENST00000460498 340 ntBASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 PCBP2P3-201ENST00000509726 843 ntBASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 RNA5SP503-201ENST00000517047 117 ntBASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 OR5B10P-201ENST00000532869 642 ntBASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 HIF1AP1-201ENST00000553642 175 ntBASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 RPL23AP84-201ENST00000571193 464 ntBASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 MIR548S-201ENST00000581352 82 ntBASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 NRBF2P5-201ENST00000603087 788 ntBASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 AC007619.2-201ENST00000605743 379 ntBASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 AC024940.5-201ENST00000622889 474 ntBASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 SDAD1P2-201ENST00000441308 2028 ntBASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDK5RAP3Q96JB5 AL137003.2-201ENST00000606924 2538 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 RNA5SP51-201ENST00000364750 119 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 RNU6-61P-201ENST00000365528 109 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 RNU6-1029P-201ENST00000384109 107 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 RNY3P14-201ENST00000384309 102 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 MIR514A1-201ENST00000385133 98 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 RNU6-1068P-201ENST00000410958 103 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 ATP5JP1-201ENST00000431631 322 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 RPL21P133-201ENST00000443666 476 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 AC073415.1-201ENST00000449240 153 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 FABP5P13-201ENST00000452144 328 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 AL162395.1-201ENST00000457882 422 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 GMFBP1-201ENST00000467831 427 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 FCF1P3-201ENST00000496394 590 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 AL359273.1-201ENST00000510918 627 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 RN7SKP18-201ENST00000516005 275 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 RN7SKP258-201ENST00000517151 304 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 RNU1-45P-201ENST00000517191 141 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 RANP9-201ENST00000519957 271 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 AL121576.1-201ENST00000556055 276 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 AC093227.2-201ENST00000589357 285 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 AP002826.1-201ENST00000608835 315 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 AC099778.2-201ENST00000610904 211 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 AP003355.3-201ENST00000623465 114 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 AC099654.14-201ENST00000638599 341 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 AC119674.1-207ENST00000641355 633 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 API5P2-201ENST00000397055 1498 ntBASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDK5RAP3Q96JB5 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 RPS4XP5-202ENST00000449995 1334 ntBASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 AC073073.2-201ENST00000609827 2578 ntBASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 Y_RNA.88-201ENST00000363029 99 ntBASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 RNU6-283P-201ENST00000364788 107 ntBASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 MIR493-201ENST00000385254 89 ntBASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 RPL21P17-201ENST00000397467 475 ntBASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 U3.42-201ENST00000408746 214 ntBASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 Y_RNA.604-201ENST00000410574 102 ntBASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 ATP5A1P2-201ENST00000412323 255 ntBASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 AL139413.1-201ENST00000421309 217 ntBASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 AC007389.2-201ENST00000434630 306 ntBASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 TXNP1-201ENST00000441872 371 ntBASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 AC012181.1-201ENST00000479895 423 ntBASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms