Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 NUTF2P8-201ENST00000604593 363 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AL031775.1-201ENST00000607014 887 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AL391813.2-201ENST00000609113 322 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AC034102.8-201ENST00000615146 484 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AC006133.1-201ENST00000617106 264 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AC009878.1-201ENST00000621819 340 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AF246928.1-201ENST00000623768 87 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AC099654.7-201ENST00000635788 2127 ntBASIC2.26□□□□□ -2.05
RPUSD4Q96CM3 AC092104.1-201ENST00000497346 1441 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 MIR325-201ENST00000385260 98 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 AL512633.1-201ENST00000399931 655 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 AC005300.1-201ENST00000428401 373 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 AC005326.1-201ENST00000429197 123 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 CETN4P-201ENST00000432407 469 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 MTND1P30-201ENST00000441241 901 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 MTATP6P30-201ENST00000443540 664 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 AC091153.1-201ENST00000466297 402 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 RPS3AP43-201ENST00000479743 781 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 SNORA67.7-201ENST00000516664 135 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 AC107934.1-201ENST00000522215 217 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 OR4R1P-201ENST00000529879 463 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 AC109446.2-201ENST00000567872 497 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 MIR3915-201ENST00000578518 97 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 MIR3118-1-201ENST00000581787 76 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 AC060766.3-201ENST00000591442 263 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 AC008277.2-201ENST00000605196 797 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 AC103710.2-201ENST00000609912 942 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 FTX_3.1-201ENST00000610451 147 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 MIR7975-201ENST00000619350 68 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 AC010149.2-201ENST00000637608 315 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 AC099654.13-201ENST00000639774 207 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 AC093536.2-201ENST00000565257 1406 ntBASIC2.25□□□□□ -2.05
RPUSD4Q96CM3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 RNU4-21P-201ENST00000362802 126 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 RNA5SP139-201ENST00000364340 117 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 RNU4-91P-201ENST00000364778 135 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 RNU5E-5P-201ENST00000365379 116 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 Y_RNA.560-201ENST00000384689 102 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 MIR888-201ENST00000401186 77 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 AL139397.2-201ENST00000404529 772 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 ELOCP17-201ENST00000414751 326 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 MTND2P18-201ENST00000419962 1030 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 AC099548.1-201ENST00000421443 426 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 AC006366.1-201ENST00000422002 759 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 ZNF863P-201ENST00000426746 417 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 RPL22P17-201ENST00000438729 315 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 PRDX3P3-201ENST00000447765 522 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 AL590365.1-201ENST00000450788 243 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 PRSS3P4-201ENST00000453323 162 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 KATNBL1P6-201ENST00000453433 915 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 AL031183.1-201ENST00000457667 207 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 SNORD97-201ENST00000459187 142 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 SNORA84-201ENST00000459229 133 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 KC877373.1-201ENST00000479066 408 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 SCARNA13-201ENST00000516672 275 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 RNU6-928P-201ENST00000516876 104 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 AP003467.2-201ENST00000520175 319 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 AC012065.4-201ENST00000602445 679 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 AC121334.2-201ENST00000605387 271 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 RNU6-87P-201ENST00000607561 108 ntBASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.24□□□□□ -2.05
RPUSD4Q96CM3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms