Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3□□□□□ -1.93
VPS33AQ96AX1 H3F3AP1-201ENST00000559984 334 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 AC109446.2-201ENST00000567872 497 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 BNIP3P9-201ENST00000603714 553 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 AC019159.1-201ENST00000605094 187 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3□□□□□ -1.93
VPS33AQ96AX1 AC013562.2-201ENST00000611632 603 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 AC131902.3-201ENST00000611767 581 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 AC244100.1-202ENST00000621554 382 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VPS33AQ96AX1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VPS33AQ96AX1 MAPK10-266ENST00000641066 6555 ntBASIC3□□□□□ -1.93
VPS33AQ96AX1 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3□□□□□ -1.93
VPS33AQ96AX1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3□□□□□ -1.93
VPS33AQ96AX1 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3□□□□□ -1.93
VPS33AQ96AX1 AC108206.1-201ENST00000570186 4159 ntBASIC2.99□□□□□ -1.93
VPS33AQ96AX1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS33AQ96AX1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS33AQ96AX1 RN7SKP220-201ENST00000410611 288 ntBASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AC023141.4-201ENST00000412031 328 ntBASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AL589872.1-201ENST00000426602 288 ntBASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AL451062.2-201ENST00000427515 271 ntBASIC2.99□□□□□ -1.93
VPS33AQ96AX1 PGBD4P3-201ENST00000440731 581 ntBASIC2.99□□□□□ -1.93
VPS33AQ96AX1 MTND4P25-201ENST00000441039 533 ntBASIC2.99□□□□□ -1.93
VPS33AQ96AX1 RPL27AP5-201ENST00000469428 449 ntBASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AC128713.1-201ENST00000471495 306 ntBASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AC068587.1-201ENST00000483613 781 ntBASIC2.99□□□□□ -1.93
VPS33AQ96AX1 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.99□□□□□ -1.93
VPS33AQ96AX1 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AC118465.1-201ENST00000513820 1271 ntBASIC2.99□□□□□ -1.93
VPS33AQ96AX1 RNU6-143P-201ENST00000516942 93 ntBASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AC009977.1-201ENST00000586015 570 ntBASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AC006130.2-201ENST00000586202 326 ntBASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.99□□□□□ -1.93
VPS33AQ96AX1 BNIP3P8-201ENST00000597863 560 ntBASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AC073657.2-201ENST00000605661 303 ntBASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AP002360.4-201ENST00000606980 481 ntBASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AL392048.1-201ENST00000613946 534 ntBASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AC091931.1-201ENST00000623488 728 ntBASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AC019226.2-201ENST00000625973 424 ntBASIC2.99□□□□□ -1.93
VPS33AQ96AX1 AC025048.6-202ENST00000627667 438 ntBASIC2.99□□□□□ -1.93
VPS33AQ96AX1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS33AQ96AX1 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS33AQ96AX1 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VPS33AQ96AX1 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VPS33AQ96AX1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS33AQ96AX1 AC073343.1-201ENST00000328239 651 ntBASIC2.98□□□□□ -1.93
VPS33AQ96AX1 SNORD56.2-201ENST00000363242 71 ntBASIC2.98□□□□□ -1.93
VPS33AQ96AX1 RNU4-91P-201ENST00000364778 135 ntBASIC2.98□□□□□ -1.93
VPS33AQ96AX1 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
VPS33AQ96AX1 RNU6-750P-201ENST00000390946 107 ntBASIC2.98□□□□□ -1.93
VPS33AQ96AX1 RPL23AP32-201ENST00000395315 459 ntBASIC2.98□□□□□ -1.93
VPS33AQ96AX1 AL512633.1-201ENST00000399931 655 ntBASIC2.98□□□□□ -1.93
VPS33AQ96AX1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.98□□□□□ -1.93
VPS33AQ96AX1 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS33AQ96AX1 AL513477.1-202ENST00000417061 214 ntBASIC2.98□□□□□ -1.93
VPS33AQ96AX1 RPL7P10-201ENST00000417407 739 ntBASIC2.98□□□□□ -1.93
VPS33AQ96AX1 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS33AQ96AX1 AC005300.1-201ENST00000428401 373 ntBASIC2.98□□□□□ -1.93
VPS33AQ96AX1 HMGN2P31-201ENST00000432430 273 ntBASIC2.98□□□□□ -1.93
VPS33AQ96AX1 AL590639.1-201ENST00000456484 337 ntBASIC2.98□□□□□ -1.93
VPS33AQ96AX1 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS33AQ96AX1 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS33AQ96AX1 RNU6-703P-201ENST00000516946 107 ntBASIC2.98□□□□□ -1.93
VPS33AQ96AX1 RNU6-56P-201ENST00000516986 93 ntBASIC2.98□□□□□ -1.93
VPS33AQ96AX1 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.98□□□□□ -1.93
VPS33AQ96AX1 MIR548AB-201ENST00000584917 84 ntBASIC2.98□□□□□ -1.93
VPS33AQ96AX1 AC011471.1-201ENST00000585766 187 ntBASIC2.98□□□□□ -1.93
VPS33AQ96AX1 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS33AQ96AX1 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS33AQ96AX1 BNIP3P33-201ENST00000598912 569 ntBASIC2.98□□□□□ -1.93
VPS33AQ96AX1 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS33AQ96AX1 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS33AQ96AX1 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS33AQ96AX1 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
VPS33AQ96AX1 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.98□□□□□ -1.93
VPS33AQ96AX1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.98□□□□□ -1.93
VPS33AQ96AX1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
VPS33AQ96AX1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.98□□□□□ -1.93
VPS33AQ96AX1 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
VPS33AQ96AX1 AC092447.7-201ENST00000422212 1621 ntBASIC2.97□□□□□ -1.93
VPS33AQ96AX1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS33AQ96AX1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VPS33AQ96AX1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.97□□□□□ -1.93
VPS33AQ96AX1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VPS33AQ96AX1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VPS33AQ96AX1 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VPS33AQ96AX1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms