Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
RNF34Q969K3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RNF34Q969K3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
RNF34Q969K3 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF34Q969K3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF34Q969K3 RNU6-954P-201ENST00000411355 107 ntBASIC4.71□□□□□ -1.66
RNF34Q969K3 ATG3P1-201ENST00000419507 911 ntBASIC4.71□□□□□ -1.66
RNF34Q969K3 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.71□□□□□ -1.66
RNF34Q969K3 AC092047.1-201ENST00000424997 240 ntBASIC4.71□□□□□ -1.66
RNF34Q969K3 UBE2V1P4-201ENST00000425374 344 ntBASIC4.71□□□□□ -1.66
RNF34Q969K3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF34Q969K3 MYL8P-204ENST00000431574 518 ntBASIC4.71□□□□□ -1.66
RNF34Q969K3 AL512844.2-201ENST00000433990 593 ntBASIC4.71□□□□□ -1.66
RNF34Q969K3 SNRPEP9-201ENST00000436794 238 ntBASIC4.71□□□□□ -1.66
RNF34Q969K3 HMGB1P12-201ENST00000438594 598 ntBASIC4.71□□□□□ -1.66
RNF34Q969K3 AC012671.1-201ENST00000451912 203 ntBASIC4.71□□□□□ -1.66
RNF34Q969K3 DHFRP3-201ENST00000455595 559 ntBASIC4.71□□□□□ -1.66
RNF34Q969K3 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF34Q969K3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.71□□□□□ -1.66
RNF34Q969K3 AC011005.2-201ENST00000487324 359 ntBASIC4.71□□□□□ -1.66
RNF34Q969K3 RPL21P13-201ENST00000488305 481 ntBASIC4.71□□□□□ -1.66
RNF34Q969K3 AC015795.1-201ENST00000513669 327 ntBASIC4.71□□□□□ -1.66
RNF34Q969K3 RNU6-1282P-201ENST00000516735 96 ntBASIC4.71□□□□□ -1.66
RNF34Q969K3 RNU6-1213P-201ENST00000517075 94 ntBASIC4.71□□□□□ -1.66
RNF34Q969K3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RNF34Q969K3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.71□□□□□ -1.66
RNF34Q969K3 MIR4284-201ENST00000578924 81 ntBASIC4.71□□□□□ -1.66
RNF34Q969K3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF34Q969K3 AC099506.2-201ENST00000623074 221 ntBASIC4.71□□□□□ -1.66
RNF34Q969K3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF34Q969K3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF34Q969K3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF34Q969K3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RNF34Q969K3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.71□□□□□ -1.66
RNF34Q969K3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF34Q969K3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF34Q969K3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF34Q969K3 SNORD3E-201ENST00000362899 217 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 RNU6-1188P-201ENST00000363795 107 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 Y_RNA.202-201ENST00000364083 110 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 SNORA33.2-201ENST00000365413 134 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 RNU6-1160P-201ENST00000384546 104 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 RNU6-95P-201ENST00000384697 107 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 YPEL5P1-201ENST00000419731 367 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 RPL7AP25-201ENST00000423357 805 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 Z74021.1-201ENST00000423610 407 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 UBE2D3P2-201ENST00000424409 445 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF34Q969K3 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF34Q969K3 AC073587.1-201ENST00000447093 876 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 NDUFB1P2-201ENST00000449477 176 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 MTCO3P10-201ENST00000455912 772 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 RPL30P15-201ENST00000457129 321 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF34Q969K3 Y_RNA.653-201ENST00000459091 95 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 RPL21P126-201ENST00000470049 478 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF34Q969K3 AC139453.3-201ENST00000493276 369 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
RNF34Q969K3 AC116337.1-201ENST00000509680 687 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF34Q969K3 AC092436.3-201ENST00000511788 257 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF34Q969K3 RNU6-1016P-201ENST00000516689 94 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 AC009902.1-201ENST00000519351 183 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF34Q969K3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.7□□□□□ -1.66
RNF34Q969K3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF34Q969K3 AC084783.1-201ENST00000565846 910 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.7□□□□□ -1.66
RNF34Q969K3 RNF138P2-201ENST00000603490 592 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 AC016925.2-201ENST00000605108 242 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 AL355802.3-201ENST00000607571 545 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 AC091905.2-201ENST00000623143 306 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 AC048347.1-201ENST00000624621 427 ntBASIC4.7□□□□□ -1.66
RNF34Q969K3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF34Q969K3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RNF34Q969K3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF34Q969K3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF34Q969K3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF34Q969K3 OR56B2P-202ENST00000641377 2453 ntBASIC4.69□□□□□ -1.66
RNF34Q969K3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
RNF34Q969K3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF34Q969K3 Y_RNA.146-201ENST00000363549 102 ntBASIC4.69□□□□□ -1.66
RNF34Q969K3 RNU1-32P-201ENST00000363937 159 ntBASIC4.69□□□□□ -1.66
RNF34Q969K3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF34Q969K3 SNORA22B-201ENST00000383876 138 ntBASIC4.69□□□□□ -1.66
RNF34Q969K3 RNU6-140P-201ENST00000384566 108 ntBASIC4.69□□□□□ -1.66
RNF34Q969K3 MIR659-201ENST00000384963 97 ntBASIC4.69□□□□□ -1.66
RNF34Q969K3 Y_RNA.623-201ENST00000411128 95 ntBASIC4.69□□□□□ -1.66
RNF34Q969K3 RNU6-293P-201ENST00000411259 106 ntBASIC4.69□□□□□ -1.66
RNF34Q969K3 RPEP3-201ENST00000425462 676 ntBASIC4.69□□□□□ -1.66
RNF34Q969K3 TOMM20P4-201ENST00000427861 435 ntBASIC4.69□□□□□ -1.66
RNF34Q969K3 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.69□□□□□ -1.66
RNF34Q969K3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF34Q969K3 AL583843.1-201ENST00000456070 346 ntBASIC4.69□□□□□ -1.66
RNF34Q969K3 RPS23P3-201ENST00000470993 430 ntBASIC4.69□□□□□ -1.66
RNF34Q969K3 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF34Q969K3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms