Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC034102.8-201ENST00000615146 484 ntBASIC4.06□□□□□ -1.76
HPS3Q969F9 AL359547.2-201ENST00000615810 418 ntBASIC4.06□□□□□ -1.76
HPS3Q969F9 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HPS3Q969F9 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
HPS3Q969F9 AP001148.1-201ENST00000624124 2359 ntBASIC4.06□□□□□ -1.76
HPS3Q969F9 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HPS3Q969F9 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
HPS3Q969F9 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
HPS3Q969F9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HPS3Q969F9 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HPS3Q969F9 MTND4P14-201ENST00000435799 1354 ntBASIC4.05□□□□□ -1.76
HPS3Q969F9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HPS3Q969F9 Y_RNA.38-201ENST00000362617 102 ntBASIC4.05□□□□□ -1.76
HPS3Q969F9 RNA5SP124-201ENST00000362739 110 ntBASIC4.05□□□□□ -1.76
HPS3Q969F9 RNY3P3-201ENST00000363816 102 ntBASIC4.05□□□□□ -1.76
HPS3Q969F9 RNU6-283P-201ENST00000364788 107 ntBASIC4.05□□□□□ -1.76
HPS3Q969F9 Y_RNA.576-201ENST00000384781 102 ntBASIC4.05□□□□□ -1.76
HPS3Q969F9 SNORD37.1-201ENST00000390968 65 ntBASIC4.05□□□□□ -1.76
HPS3Q969F9 AL391417.1-201ENST00000404100 426 ntBASIC4.05□□□□□ -1.76
HPS3Q969F9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.05□□□□□ -1.76
HPS3Q969F9 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.05□□□□□ -1.76
HPS3Q969F9 AL109913.1-201ENST00000421173 514 ntBASIC4.05□□□□□ -1.76
HPS3Q969F9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
HPS3Q969F9 PRDX3P3-201ENST00000447765 522 ntBASIC4.05□□□□□ -1.76
HPS3Q969F9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.05□□□□□ -1.76
HPS3Q969F9 CACYBPP2-201ENST00000453625 678 ntBASIC4.05□□□□□ -1.76
HPS3Q969F9 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.05□□□□□ -1.76
HPS3Q969F9 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.05□□□□□ -1.76
HPS3Q969F9 AL049830.2-201ENST00000480072 201 ntBASIC4.05□□□□□ -1.76
HPS3Q969F9 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.05□□□□□ -1.76
HPS3Q969F9 FCF1P3-201ENST00000496394 590 ntBASIC4.05□□□□□ -1.76
HPS3Q969F9 AC104806.1-201ENST00000508720 308 ntBASIC4.05□□□□□ -1.76
HPS3Q969F9 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HPS3Q969F9 PCBP2P3-201ENST00000509726 843 ntBASIC4.05□□□□□ -1.76
HPS3Q969F9 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.05□□□□□ -1.76
HPS3Q969F9 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.05□□□□□ -1.76
HPS3Q969F9 MIR5187-201ENST00000583479 76 ntBASIC4.05□□□□□ -1.76
HPS3Q969F9 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.05□□□□□ -1.76
HPS3Q969F9 KLKP1-201ENST00000595979 403 ntBASIC4.05□□□□□ -1.76
HPS3Q969F9 AL158032.1-201ENST00000605401 106 ntBASIC4.05□□□□□ -1.76
HPS3Q969F9 AC008945.2-201ENST00000606056 604 ntBASIC4.05□□□□□ -1.76
HPS3Q969F9 AC011155.2-201ENST00000623202 216 ntBASIC4.05□□□□□ -1.76
HPS3Q969F9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.05□□□□□ -1.76
HPS3Q969F9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HPS3Q969F9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.05□□□□□ -1.76
HPS3Q969F9 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
HPS3Q969F9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HPS3Q969F9 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.04□□□□□ -1.76
HPS3Q969F9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
HPS3Q969F9 RNU6-288P-201ENST00000363690 104 ntBASIC4.04□□□□□ -1.76
HPS3Q969F9 RNA5SP51-201ENST00000364750 119 ntBASIC4.04□□□□□ -1.76
HPS3Q969F9 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.04□□□□□ -1.76
HPS3Q969F9 SNORA11.1-201ENST00000408133 129 ntBASIC4.04□□□□□ -1.76
HPS3Q969F9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.04□□□□□ -1.76
HPS3Q969F9 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.04□□□□□ -1.76
HPS3Q969F9 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.04□□□□□ -1.76
HPS3Q969F9 MTCYBP8-201ENST00000422855 651 ntBASIC4.04□□□□□ -1.76
HPS3Q969F9 AC018644.1-201ENST00000429934 551 ntBASIC4.04□□□□□ -1.76
HPS3Q969F9 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.04□□□□□ -1.76
HPS3Q969F9 AC073415.1-201ENST00000449240 153 ntBASIC4.04□□□□□ -1.76
HPS3Q969F9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.04□□□□□ -1.76
HPS3Q969F9 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.04□□□□□ -1.76
HPS3Q969F9 RPS20P22-201ENST00000473700 357 ntBASIC4.04□□□□□ -1.76
HPS3Q969F9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.04□□□□□ -1.76
HPS3Q969F9 Y_RNA.689-201ENST00000516589 107 ntBASIC4.04□□□□□ -1.76
HPS3Q969F9 SNORA70.18-201ENST00000516696 98 ntBASIC4.04□□□□□ -1.76
HPS3Q969F9 RN7SKP219-201ENST00000516825 296 ntBASIC4.04□□□□□ -1.76
HPS3Q969F9 SNORD60.2-201ENST00000516883 86 ntBASIC4.04□□□□□ -1.76
HPS3Q969F9 RNA5SP291-201ENST00000517222 105 ntBASIC4.04□□□□□ -1.76
HPS3Q969F9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.04□□□□□ -1.76
HPS3Q969F9 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.04□□□□□ -1.76
HPS3Q969F9 OR5B10P-201ENST00000532869 642 ntBASIC4.04□□□□□ -1.76
HPS3Q969F9 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.04□□□□□ -1.76
HPS3Q969F9 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.04□□□□□ -1.76
HPS3Q969F9 MIR4703-201ENST00000577728 79 ntBASIC4.04□□□□□ -1.76
HPS3Q969F9 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.04□□□□□ -1.76
HPS3Q969F9 AC024220.1-201ENST00000603675 484 ntBASIC4.04□□□□□ -1.76
HPS3Q969F9 AC012409.4-201ENST00000612923 249 ntBASIC4.04□□□□□ -1.76
HPS3Q969F9 AL121772.2-201ENST00000614331 297 ntBASIC4.04□□□□□ -1.76
HPS3Q969F9 AC024940.5-201ENST00000622889 474 ntBASIC4.04□□□□□ -1.76
HPS3Q969F9 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.04□□□□□ -1.76
HPS3Q969F9 MTND5P42-201ENST00000637720 498 ntBASIC4.04□□□□□ -1.76
HPS3Q969F9 AC004972.1-201ENST00000623934 2209 ntBASIC4.04□□□□□ -1.76
HPS3Q969F9 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HPS3Q969F9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.03□□□□□ -1.76
HPS3Q969F9 AC007823.1-201ENST00000569932 1566 ntBASIC4.03□□□□□ -1.76
HPS3Q969F9 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.03□□□□□ -1.76
HPS3Q969F9 NACAP2-201ENST00000318548 624 ntBASIC4.03□□□□□ -1.76
HPS3Q969F9 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
HPS3Q969F9 RNU6-14P-201ENST00000384630 106 ntBASIC4.03□□□□□ -1.76
HPS3Q969F9 MIR449B-201ENST00000384995 97 ntBASIC4.03□□□□□ -1.76
HPS3Q969F9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.03□□□□□ -1.76
HPS3Q969F9 USP9YP6-201ENST00000413550 854 ntBASIC4.03□□□□□ -1.76
HPS3Q969F9 AC009237.5-201ENST00000414271 501 ntBASIC4.03□□□□□ -1.76
HPS3Q969F9 DBIP2-201ENST00000419076 262 ntBASIC4.03□□□□□ -1.76
HPS3Q969F9 AC245054.1-201ENST00000420944 258 ntBASIC4.03□□□□□ -1.76
HPS3Q969F9 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.03□□□□□ -1.76
HPS3Q969F9 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.03□□□□□ -1.76
HPS3Q969F9 MTCO3P18-201ENST00000440206 761 ntBASIC4.03□□□□□ -1.76
HPS3Q969F9 CBWD4P-201ENST00000445695 655 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms