Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.52□□□□□ -1.69
RTF1Q92541 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.52□□□□□ -1.69
RTF1Q92541 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RTF1Q92541 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RTF1Q92541 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
RTF1Q92541 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RTF1Q92541 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.51□□□□□ -1.69
RTF1Q92541 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.51□□□□□ -1.69
RTF1Q92541 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
RTF1Q92541 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RTF1Q92541 RNU6-845P-201ENST00000362578 103 ntBASIC4.51□□□□□ -1.69
RTF1Q92541 RNU6-1249P-201ENST00000363237 111 ntBASIC4.51□□□□□ -1.69
RTF1Q92541 RNU6-1155P-201ENST00000363554 107 ntBASIC4.51□□□□□ -1.69
RTF1Q92541 RNU6-1284P-201ENST00000363701 100 ntBASIC4.51□□□□□ -1.69
RTF1Q92541 RNA5SP235-201ENST00000365411 114 ntBASIC4.51□□□□□ -1.69
RTF1Q92541 RNU6-641P-201ENST00000384006 107 ntBASIC4.51□□□□□ -1.69
RTF1Q92541 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.51□□□□□ -1.69
RTF1Q92541 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.51□□□□□ -1.69
RTF1Q92541 MRPS17P3-201ENST00000465453 385 ntBASIC4.51□□□□□ -1.69
RTF1Q92541 NIPA2P2-201ENST00000496376 1083 ntBASIC4.51□□□□□ -1.69
RTF1Q92541 AC093663.1-201ENST00000497190 394 ntBASIC4.51□□□□□ -1.69
RTF1Q92541 EIF4EP3-201ENST00000498782 656 ntBASIC4.51□□□□□ -1.69
RTF1Q92541 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.51□□□□□ -1.69
RTF1Q92541 RNU4-60P-201ENST00000517239 135 ntBASIC4.51□□□□□ -1.69
RTF1Q92541 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.51□□□□□ -1.69
RTF1Q92541 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.51□□□□□ -1.69
RTF1Q92541 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.51□□□□□ -1.69
RTF1Q92541 SUB1P1-201ENST00000524415 382 ntBASIC4.51□□□□□ -1.69
RTF1Q92541 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.51□□□□□ -1.69
RTF1Q92541 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.51□□□□□ -1.69
RTF1Q92541 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.51□□□□□ -1.69
RTF1Q92541 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.51□□□□□ -1.69
RTF1Q92541 AC123904.3-201ENST00000547218 814 ntBASIC4.51□□□□□ -1.69
RTF1Q92541 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.51□□□□□ -1.69
RTF1Q92541 MIR4775-201ENST00000581168 75 ntBASIC4.51□□□□□ -1.69
RTF1Q92541 AL356055.1-201ENST00000602528 446 ntBASIC4.51□□□□□ -1.69
RTF1Q92541 AP001486.3-201ENST00000615334 372 ntBASIC4.51□□□□□ -1.69
RTF1Q92541 AL136221.1-201ENST00000621449 509 ntBASIC4.51□□□□□ -1.69
RTF1Q92541 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.51□□□□□ -1.69
RTF1Q92541 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RTF1Q92541 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.51□□□□□ -1.69
RTF1Q92541 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
RTF1Q92541 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
RTF1Q92541 DDX10P1-201ENST00000448545 1933 ntBASIC4.5□□□□□ -1.69
RTF1Q92541 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RTF1Q92541 OR4G1P-203ENST00000641984 1631 ntBASIC4.5□□□□□ -1.69
RTF1Q92541 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RTF1Q92541 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RTF1Q92541 Y_RNA.166-201ENST00000363730 102 ntBASIC4.5□□□□□ -1.69
RTF1Q92541 RNU6-283P-201ENST00000364788 107 ntBASIC4.5□□□□□ -1.69
RTF1Q92541 AL391417.1-201ENST00000404100 426 ntBASIC4.5□□□□□ -1.69
RTF1Q92541 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.5□□□□□ -1.69
RTF1Q92541 RNU2-36P-201ENST00000410361 191 ntBASIC4.5□□□□□ -1.69
RTF1Q92541 RNU6-193P-201ENST00000410977 107 ntBASIC4.5□□□□□ -1.69
RTF1Q92541 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.5□□□□□ -1.69
RTF1Q92541 RPL23AP83-201ENST00000434984 473 ntBASIC4.5□□□□□ -1.69
RTF1Q92541 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.5□□□□□ -1.69
RTF1Q92541 RPS15AP36-201ENST00000492022 382 ntBASIC4.5□□□□□ -1.69
RTF1Q92541 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.5□□□□□ -1.69
RTF1Q92541 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.5□□□□□ -1.69
RTF1Q92541 AC026427.2-201ENST00000506228 536 ntBASIC4.5□□□□□ -1.69
RTF1Q92541 SNORA70.24-201ENST00000517233 118 ntBASIC4.5□□□□□ -1.69
RTF1Q92541 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.5□□□□□ -1.69
RTF1Q92541 CBX3P7-201ENST00000532876 502 ntBASIC4.5□□□□□ -1.69
RTF1Q92541 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.5□□□□□ -1.69
RTF1Q92541 AC026333.2-201ENST00000542164 106 ntBASIC4.5□□□□□ -1.69
RTF1Q92541 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.5□□□□□ -1.69
RTF1Q92541 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.5□□□□□ -1.69
RTF1Q92541 AC012669.1-201ENST00000603209 283 ntBASIC4.5□□□□□ -1.69
RTF1Q92541 RNA5SP108-201ENST00000605921 117 ntBASIC4.5□□□□□ -1.69
RTF1Q92541 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.5□□□□□ -1.69
RTF1Q92541 uc_338.11-201ENST00000619132 160 ntBASIC4.5□□□□□ -1.69
RTF1Q92541 C2orf27A-204ENST00000623058 969 ntBASIC4.5□□□□□ -1.69
RTF1Q92541 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.5□□□□□ -1.69
RTF1Q92541 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.5□□□□□ -1.69
RTF1Q92541 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.5□□□□□ -1.69
RTF1Q92541 AC068647.1-201ENST00000489539 2265 ntBASIC4.49□□□□□ -1.69
RTF1Q92541 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RTF1Q92541 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.49□□□□□ -1.69
RTF1Q92541 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RTF1Q92541 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.49□□□□□ -1.69
RTF1Q92541 AC092326.2-201ENST00000624772 1561 ntBASIC4.49□□□□□ -1.69
RTF1Q92541 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RTF1Q92541 AL139276.1-201ENST00000311910 1001 ntBASIC4.49□□□□□ -1.69
RTF1Q92541 Y_RNA.142-201ENST00000363491 102 ntBASIC4.49□□□□□ -1.69
RTF1Q92541 RNU6-960P-201ENST00000364056 120 ntBASIC4.49□□□□□ -1.69
RTF1Q92541 Y_RNA.813-201ENST00000364639 102 ntBASIC4.49□□□□□ -1.69
RTF1Q92541 RNU6-712P-201ENST00000410558 100 ntBASIC4.49□□□□□ -1.69
RTF1Q92541 RNA5SP120-201ENST00000410900 112 ntBASIC4.49□□□□□ -1.69
RTF1Q92541 MTCYBP8-201ENST00000422855 651 ntBASIC4.49□□□□□ -1.69
RTF1Q92541 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.49□□□□□ -1.69
RTF1Q92541 AC017083.1-201ENST00000428093 483 ntBASIC4.49□□□□□ -1.69
RTF1Q92541 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.49□□□□□ -1.69
RTF1Q92541 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.49□□□□□ -1.69
RTF1Q92541 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.49□□□□□ -1.69
RTF1Q92541 AC093278.1-201ENST00000494700 600 ntBASIC4.49□□□□□ -1.69
RTF1Q92541 AC026801.2-201ENST00000515352 425 ntBASIC4.49□□□□□ -1.69
RTF1Q92541 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.49□□□□□ -1.69
RTF1Q92541 RN7SKP219-201ENST00000516825 296 ntBASIC4.49□□□□□ -1.69
RTF1Q92541 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms