Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL357559.1-201ENST00000622228 274 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AL354798.1-201ENST00000622505 329 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 RNU6-1279P-201ENST00000383917 103 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 MTHFD2P2-201ENST00000407725 247 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 BX323014.1-201ENST00000412876 237 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 AC006989.1-201ENST00000427212 131 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 AC008850.1-201ENST00000427546 362 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 RPL7L1P10-201ENST00000427790 463 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 NEFMP1-201ENST00000443423 1006 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 HSFY6P-201ENST00000445573 403 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 MRPL50P4-201ENST00000446432 475 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 VN1R104P-201ENST00000505115 1009 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 Y_RNA.675-201ENST00000516389 149 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 AC105029.1-201ENST00000520250 669 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 AP006245.1-201ENST00000522549 120 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 AC109635.4-202ENST00000531666 412 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 AL118558.2-201ENST00000556294 238 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 MIR5583-1-201ENST00000580941 59 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 AC174048.1-201ENST00000603389 144 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 AC007619.2-201ENST00000605743 379 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 RNU1-30P-201ENST00000606575 163 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 AL365204.3-201ENST00000612448 685 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 uc_338.32-201ENST00000615087 172 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 AL157700.1-201ENST00000561973 1432 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 PNPT1P2-201ENST00000456768 2050 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
ATG4AQ8WYN0 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 RNU6-173P-201ENST00000364215 104 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 U3.12-201ENST00000364498 214 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 SNORA36C-201ENST00000384289 132 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 AL122016.1-201ENST00000403365 367 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 RWDD4P2-201ENST00000426392 563 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 MTND1P14-201ENST00000427400 950 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 AC004975.1-201ENST00000428733 208 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 FABP5P13-201ENST00000452144 328 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 RNU6-1208P-201ENST00000459588 107 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 AC103851.1-201ENST00000506833 274 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 CCDC34P1-201ENST00000507441 517 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 RBBP4P6-201ENST00000508098 202 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 KLHL2P1-201ENST00000508691 521 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 FAM206BP-201ENST00000510179 541 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 RNU4-49P-201ENST00000516080 140 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 RN7SKP258-201ENST00000517151 304 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 AC011611.1-201ENST00000552179 197 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 SCOCP1-201ENST00000554676 349 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 MIR4742-201ENST00000581069 85 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 BDH2P1-201ENST00000602288 736 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 AC006077.1-201ENST00000604746 343 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 RNVU1-4-201ENST00000612985 164 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 AC005344.1-201ENST00000613391 459 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 ZYXP1-201ENST00000617638 118 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 TPTEP1-208ENST00000636884 213 ntBASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATG4AQ8WYN0 AP004289.2-201ENST00000444413 1457 ntBASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
ATG4AQ8WYN0 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms