Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SNED1Q8TER0 Y_RNA.61-201ENST00000362835 102 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 RNU6-582P-201ENST00000362989 107 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 SUGT1P1-201ENST00000379514 476 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 RNU6-1181P-201ENST00000384191 106 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 RNU6-837P-201ENST00000391056 108 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 RPL23AP29-201ENST00000397284 453 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 FGF7P8-201ENST00000402994 292 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 CCNG1P1-201ENST00000406783 885 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 Y_RNA.598-201ENST00000410480 95 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.28□□□□□ -1.88
SNED1Q8TER0 VDAC1P3-201ENST00000434069 851 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 AL022238.1-201ENST00000442557 355 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 HMGB3P8-201ENST00000449709 577 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.28□□□□□ -1.88
SNED1Q8TER0 RPL23AP31-201ENST00000456160 467 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 SNRPFP4-201ENST00000456366 242 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 RPL23AP14-201ENST00000468281 468 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.28□□□□□ -1.88
SNED1Q8TER0 RPS29P21-201ENST00000496272 170 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 RNU6-1261P-201ENST00000517194 104 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.28□□□□□ -1.88
SNED1Q8TER0 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.28□□□□□ -1.88
SNED1Q8TER0 AC109635.3-201ENST00000529536 185 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.28□□□□□ -1.88
SNED1Q8TER0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.28□□□□□ -1.88
SNED1Q8TER0 MIR3690-201ENST00000580266 75 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.28□□□□□ -1.88
SNED1Q8TER0 BNIP3P8-201ENST00000597863 560 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.28□□□□□ -1.88
SNED1Q8TER0 AL390208.1-201ENST00000605885 644 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 AC009994.1-201ENST00000606889 253 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.28□□□□□ -1.88
SNED1Q8TER0 AC007742.2-201ENST00000618226 398 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 AC006111.3-201ENST00000622137 383 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 MIR6863-201ENST00000636112 90 ntBASIC3.28□□□□□ -1.88
SNED1Q8TER0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.28□□□□□ -1.88
SNED1Q8TER0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SNED1Q8TER0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SNED1Q8TER0 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
SNED1Q8TER0 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.28□□□□□ -1.89
SNED1Q8TER0 Y_RNA.296-201ENST00000364930 108 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 RNU6-1122P-201ENST00000384449 107 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 MIR512-1-201ENST00000384913 84 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 RNU6-876P-201ENST00000391295 104 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 RN7SKP192-201ENST00000411291 327 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 RPS3AP9-201ENST00000417027 792 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 MTCO3P1-205ENST00000422088 832 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 RPS27AP14-201ENST00000422868 454 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SNED1Q8TER0 AL356583.2-201ENST00000426536 280 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 RPL37P21-201ENST00000435890 276 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 RPS29P6-201ENST00000438196 145 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 RPL18AP17-201ENST00000455326 198 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 AMD1P1-201ENST00000457220 922 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC013267.1-201ENST00000458227 267 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 VN1R17P-201ENST00000472048 1090 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 OR5H5P-201ENST00000503164 928 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC091133.4-201ENST00000511142 308 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 MTND5P4-201ENST00000514978 288 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 HIGD1AP6-201ENST00000521833 279 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 GLYCAM1-201ENST00000546596 285 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC136618.2-201ENST00000575091 400 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 C8orf59P2-201ENST00000603441 271 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 AL158211.4-201ENST00000606988 584 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC092954.2-201ENST00000609103 430 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC103710.1-201ENST00000610003 901 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC008250.2-201ENST00000615261 205 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC004009.2-201ENST00000623016 728 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC231657.1-201ENST00000624313 397 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC093591.3-201ENST00000634516 308 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 MIR7153-201ENST00000637758 57 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SNED1Q8TER0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SNED1Q8TER0 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SNED1Q8TER0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SNED1Q8TER0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SNED1Q8TER0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
SNED1Q8TER0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SNED1Q8TER0 RNU6-600P-201ENST00000362524 99 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 Y_RNA.25-201ENST00000362528 102 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 SNORD116-23-201ENST00000384645 92 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 RNU6-1011P-201ENST00000384668 107 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 RNU6-248P-201ENST00000410720 107 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 RNU2-41P-201ENST00000410991 178 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.27□□□□□ -1.89
SNED1Q8TER0 AC096632.1-201ENST00000427395 310 ntBASIC3.27□□□□□ -1.89
SNED1Q8TER0 MTND1P14-201ENST00000427400 950 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms