Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 TAB3P1-202ENST00000452645 1634 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 MTND5P28-201ENST00000438005 1594 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 MTND5P19-201ENST00000424872 1794 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 SNORD9-201ENST00000362566 104 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 MIR183-201ENST00000384958 110 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 RNU4-26P-201ENST00000410270 107 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 RNU2-21P-201ENST00000410368 188 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 TPMTP2-201ENST00000414372 726 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 AC004552.1-201ENST00000419089 348 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 HMGB1P12-201ENST00000438594 598 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 HMGB3P11-201ENST00000440127 604 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 AL353748.1-201ENST00000440753 474 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 RPS26P3-201ENST00000470205 348 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 AC090543.2-201ENST00000483963 348 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 AC004057.1-201ENST00000485827 348 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 HSPD1P15-201ENST00000505573 1122 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 AC021146.1-201ENST00000511202 716 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 MIR3944-201ENST00000581277 108 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 AC098848.2-201ENST00000588023 330 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 U3.45-201ENST00000607547 219 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 AC083806.3-201ENST00000614016 455 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 U6.105-201ENST00000637379 88 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 ZNF807-201ENST00000328088 1707 ntBASIC4.41□□□□□ -1.7
SH3RF3Q8TEJ3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.4□□□□□ -1.7
SH3RF3Q8TEJ3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SH3RF3Q8TEJ3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SH3RF3Q8TEJ3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.4□□□□□ -1.7
SH3RF3Q8TEJ3 MTND5P10-201ENST00000603719 1809 ntBASIC4.4□□□□□ -1.7
SH3RF3Q8TEJ3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SH3RF3Q8TEJ3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 RNU6-1115P-201ENST00000362490 106 ntBASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 Y_RNA.167-201ENST00000363735 109 ntBASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 Y_RNA.176-201ENST00000363815 109 ntBASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 Y_RNA.373-201ENST00000365600 103 ntBASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 Y_RNA.527-201ENST00000384573 102 ntBASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 DSTNP4-201ENST00000399472 474 ntBASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 RNU2-64P-201ENST00000411315 191 ntBASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 AC006548.1-201ENST00000427470 102 ntBASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 PSMA2P3-201ENST00000429685 675 ntBASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 RPL29P29-201ENST00000448725 423 ntBASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 SNORD108-201ENST00000459332 71 ntBASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 RPL21P99-201ENST00000480369 423 ntBASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 RN7SL293P-201ENST00000481765 281 ntBASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 AC068781.1-201ENST00000488231 618 ntBASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 AC091885.1-201ENST00000506658 268 ntBASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 Y_RNA.668-201ENST00000516233 93 ntBASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 RANP9-201ENST00000519957 271 ntBASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 AP002404.1-201ENST00000532005 451 ntBASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 AC015967.1-201ENST00000619893 476 ntBASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 AC032011.1-201ENST00000611703 1549 ntBASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms