Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 RNU6-1266P-201ENST00000362794 105 ntBASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 Y_RNA.81-201ENST00000362997 102 ntBASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 RNA5SP391-201ENST00000363456 119 ntBASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 RNU6-704P-201ENST00000364162 103 ntBASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 RNU6-1303P-201ENST00000364841 107 ntBASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 RNU6-701P-201ENST00000384059 107 ntBASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 MIR613-201ENST00000385248 95 ntBASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 U3.29-201ENST00000391296 212 ntBASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 TMSB10P2-201ENST00000416049 131 ntBASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 AC022034.3-201ENST00000471393 478 ntBASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 RPS29P26-201ENST00000477483 171 ntBASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 AC087441.2-201ENST00000529141 262 ntBASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 AP002392.1-201ENST00000537692 208 ntBASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 AC092470.1-201ENST00000546187 132 ntBASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 AC004584.2-201ENST00000570407 410 ntBASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 AL591516.1-201ENST00000611326 274 ntBASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 AC068724.3-201ENST00000625906 87 ntBASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.78□□□□□ -1.64
SHKBP1Q8TBC3 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 RNU1-76P-201ENST00000362903 159 ntBASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 RNU1-83P-201ENST00000363426 164 ntBASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 Y_RNA.170-201ENST00000363746 110 ntBASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 RNU6-682P-201ENST00000363843 106 ntBASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 RNU6-637P-201ENST00000384050 107 ntBASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 RNU6-45P-201ENST00000384471 107 ntBASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 AC004938.1-201ENST00000438468 308 ntBASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 AC008264.1-201ENST00000447612 367 ntBASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 RPL29P29-201ENST00000448725 423 ntBASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 snoU13.7-201ENST00000459220 104 ntBASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 RPS23P5-201ENST00000495419 428 ntBASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 AC008716.1-201ENST00000511084 513 ntBASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 Y_RNA.689-201ENST00000516589 107 ntBASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 ERHP1-201ENST00000523006 310 ntBASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 MIR4273-201ENST00000582824 84 ntBASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 AL160281.1-201ENST00000605307 311 ntBASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 AC007998.5-201ENST00000622938 237 ntBASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 AL445487.1-201ENST00000415694 1580 ntBASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHKBP1Q8TBC3 AC009951.1-201ENST00000623674 2614 ntBASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 AL391684.1-202ENST00000641293 1636 ntBASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 MIR411-201ENST00000362239 96 ntBASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 Y_RNA.122-201ENST00000363331 96 ntBASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 RN7SKP227-201ENST00000364445 330 ntBASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 RNY1P5-201ENST00000383890 115 ntBASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 RNU6-708P-201ENST00000384217 107 ntBASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 MIR628-201ENST00000385229 95 ntBASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 SDHCP2-201ENST00000398565 501 ntBASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 AL030996.1-201ENST00000411430 235 ntBASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 AC092809.3-201ENST00000415453 231 ntBASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 RPS29P17-201ENST00000430795 166 ntBASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 RPL23AP33-201ENST00000442301 452 ntBASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 AC006511.1-201ENST00000470614 315 ntBASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 RNU6-1338P-201ENST00000516328 91 ntBASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 AC126177.3-201ENST00000551839 688 ntBASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 AC025588.3-201ENST00000604182 274 ntBASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.76□□□□□ -1.65
SHKBP1Q8TBC3 AC114781.5-201ENST00000615297 108 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms