Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 CBWD4P-201ENST00000445695 655 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.04□□□□□ -2.08
LINC01560Q8TB33 GSTA11P-201ENST00000452866 669 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AL109741.2-201ENST00000455561 343 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 RNU6-420P-201ENST00000458780 107 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 RPS20P20-201ENST00000460498 340 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 RPL36AP51-201ENST00000487216 318 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 RPS15AP36-201ENST00000492022 382 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AC022447.3-201ENST00000506865 495 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.04□□□□□ -2.08
LINC01560Q8TB33 LTV1P1-201ENST00000510683 1237 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AP002748.2-201ENST00000528671 348 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 RANP3-201ENST00000530970 276 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AC013828.2-201ENST00000532487 235 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.04□□□□□ -2.08
LINC01560Q8TB33 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.04□□□□□ -2.08
LINC01560Q8TB33 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AC023050.2-201ENST00000544968 387 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
LINC01560Q8TB33 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.04□□□□□ -2.08
LINC01560Q8TB33 HMGB1P14-201ENST00000557424 591 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AC103988.1-201ENST00000566382 2177 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AC068135.2-201ENST00000569293 1028 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AC009163.5-201ENST00000575421 637 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 TPMTP1-201ENST00000592307 737 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AC021171.1-201ENST00000603137 706 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AC013244.3-201ENST00000605614 388 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AC072039.2-201ENST00000608883 439 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AC013476.2-201ENST00000614456 459 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AC012150.2-201ENST00000621300 544 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AP002782.1-201ENST00000623107 614 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AC112204.3-201ENST00000623822 332 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 AP000676.4-201ENST00000624659 623 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 MIR4275-201ENST00000636486 87 ntBASIC2.04□□□□□ -2.08
LINC01560Q8TB33 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.04□□□□□ -2.08
LINC01560Q8TB33 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LINC01560Q8TB33 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
LINC01560Q8TB33 AC104454.1-201ENST00000421341 1401 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 RNU6-1200P-201ENST00000384162 107 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 RNU6-432P-201ENST00000384196 109 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 RNU6-769P-201ENST00000384407 104 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 RNU6-1035P-201ENST00000384477 107 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 SNORA41-201ENST00000384675 132 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 ANAPC10P1-201ENST00000395991 556 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 AL109755.1-201ENST00000401791 649 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 MIR1305-201ENST00000408300 86 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 AL359704.1-201ENST00000411586 781 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 RPS24P7-201ENST00000416921 246 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 AL022400.1-201ENST00000423946 935 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 AL590383.1-201ENST00000428602 75 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 Z80107.1-201ENST00000436830 412 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 BMI1P1-201ENST00000445879 941 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LINC01560Q8TB33 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC01560Q8TB33 OR6C5P-201ENST00000452388 923 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC01560Q8TB33 ANKRD26P4-201ENST00000455755 950 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 RN7SL297P-201ENST00000483161 293 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.03□□□□□ -2.08
LINC01560Q8TB33 RPL9P6-201ENST00000492764 598 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC01560Q8TB33 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC01560Q8TB33 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC01560Q8TB33 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.03□□□□□ -2.08
LINC01560Q8TB33 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.03□□□□□ -2.08
LINC01560Q8TB33 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.03□□□□□ -2.08
LINC01560Q8TB33 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC01560Q8TB33 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.03□□□□□ -2.08
LINC01560Q8TB33 SETP2-201ENST00000553886 926 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC01560Q8TB33 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC01560Q8TB33 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC01560Q8TB33 AL354943.1-201ENST00000572103 781 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.03□□□□□ -2.08
LINC01560Q8TB33 BNIP3P23-201ENST00000599655 511 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 AC025588.2-201ENST00000604851 466 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 BX664608.1-201ENST00000610519 487 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 TUSC7.1-201ENST00000610969 165 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.03□□□□□ -2.08
LINC01560Q8TB33 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 AC093838.1-201ENST00000613014 469 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 AC068787.1-201ENST00000623908 691 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 AC090617.7-201ENST00000623952 126 ntBASIC2.03□□□□□ -2.08
LINC01560Q8TB33 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.03□□□□□ -2.08
LINC01560Q8TB33 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LINC01560Q8TB33 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
LINC01560Q8TB33 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.03□□□□□ -2.09
LINC01560Q8TB33 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 MTND4P16-201ENST00000466108 1367 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AL391994.1-201ENST00000254724 282 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms