Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 AC090425.1-201ENST00000610007 140 ntBASIC4.8□□□□□ -1.64
LINC00116Q8NCU8 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
LINC00116Q8NCU8 AC103705.1-201ENST00000619013 241 ntBASIC4.8□□□□□ -1.64
LINC00116Q8NCU8 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
LINC00116Q8NCU8 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.8□□□□□ -1.64
LINC00116Q8NCU8 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LINC00116Q8NCU8 AC007529.1-201ENST00000418574 2178 ntBASIC4.8□□□□□ -1.64
LINC00116Q8NCU8 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 SAMMSON-213ENST00000641336 1521 ntBASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 XIAPP3-201ENST00000312918 795 ntBASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 RNA5SP50-201ENST00000363731 107 ntBASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 MIR128-1-201ENST00000384921 82 ntBASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 MIR568-201ENST00000385036 95 ntBASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 UBE2FP1-201ENST00000416536 447 ntBASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 SNRPEP4-201ENST00000435815 279 ntBASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 AL035666.1-201ENST00000446195 348 ntBASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 BX276092.4-201ENST00000452056 248 ntBASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 AC010683.1-201ENST00000473673 378 ntBASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 RNU1-103P-201ENST00000516502 125 ntBASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 AC006363.1-201ENST00000603806 463 ntBASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 AL365440.1-201ENST00000436135 2167 ntBASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 AC126323.6-202ENST00000568092 3511 ntBASIC4.79□□□□□ -1.64
LINC00116Q8NCU8 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 RNU1-33P-201ENST00000364249 162 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 RNU6-907P-201ENST00000390924 102 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 RNU6-754P-201ENST00000391166 107 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 AL360182.1-201ENST00000397433 468 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 Y_RNA.646-201ENST00000410980 101 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 RPL21P24-201ENST00000413752 448 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 AC009302.1-201ENST00000417147 390 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 AC005300.1-201ENST00000428401 373 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 CALM2P2-201ENST00000428512 440 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 AC104058.1-201ENST00000448028 297 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 RPS15AP27-201ENST00000449183 343 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 AL162388.1-201ENST00000450912 352 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 SNORD105B-201ENST00000458770 79 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 RPS27AP1-201ENST00000475545 471 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 TBCAP3-201ENST00000512475 312 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 RNA5SP208-201ENST00000516156 78 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 RN7SKP277-201ENST00000516895 283 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 IGKV2-38-201ENST00000517443 247 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 MIR4680-201ENST00000580906 66 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 AC008162.1-201ENST00000604718 254 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 AL670379.4-201ENST00000605279 254 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 AL355365.1-201ENST00000616480 294 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 AL589994.2-201ENST00000621124 579 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 AL669831.3-213ENST00000636676 183 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 ZNF519P1-201ENST00000449011 1626 ntBASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LINC00116Q8NCU8 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LINC00116Q8NCU8 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.77□□□□□ -1.65
LINC00116Q8NCU8 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.77□□□□□ -1.65
LINC00116Q8NCU8 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
LINC00116Q8NCU8 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LINC00116Q8NCU8 Y_RNA.5-201ENST00000362334 102 ntBASIC4.77□□□□□ -1.65
LINC00116Q8NCU8 RNU6-1284P-201ENST00000363701 100 ntBASIC4.77□□□□□ -1.65
LINC00116Q8NCU8 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
LINC00116Q8NCU8 RNU6-339P-201ENST00000384310 107 ntBASIC4.77□□□□□ -1.65
LINC00116Q8NCU8 RNU6-1127P-201ENST00000384580 107 ntBASIC4.77□□□□□ -1.65
LINC00116Q8NCU8 MT-TC-201ENST00000387405 66 ntBASIC4.77□□□□□ -1.65
LINC00116Q8NCU8 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.77□□□□□ -1.65
LINC00116Q8NCU8 RNU6-985P-201ENST00000410182 104 ntBASIC4.77□□□□□ -1.65
LINC00116Q8NCU8 RNA5SP120-201ENST00000410900 112 ntBASIC4.77□□□□□ -1.65
LINC00116Q8NCU8 BX682237.1-201ENST00000415016 335 ntBASIC4.77□□□□□ -1.65
LINC00116Q8NCU8 REREP1Y-201ENST00000422655 198 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms