Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC073114.1-201ENST00000612027 490 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 AC090970.3-201ENST00000612566 866 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 AC013476.2-201ENST00000614456 459 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 AC009159.1-201ENST00000618386 642 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 MIR4275-201ENST00000636486 87 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 AC010149.2-201ENST00000637608 315 ntBASIC2.38□□□□□ -2.03
CCDC71LQ8N9Z2 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 MTND4P4-201ENST00000439033 1366 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 RNU4-21P-201ENST00000362802 126 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 RNU6-223P-201ENST00000362830 107 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 SNORD116-2-201ENST00000384274 95 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 SNORD116-6-201ENST00000384711 96 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 MIR23B-201ENST00000384832 97 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 MIR490-201ENST00000384865 128 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 RNA5SP354-201ENST00000391247 136 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 MIR1302-8-201ENST00000408342 128 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 USP9YP13-201ENST00000417797 480 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 AL049734.2-201ENST00000441066 616 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 BNIP3P2-201ENST00000441221 577 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 RPL12P25-201ENST00000455592 494 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 SNRPGP9-201ENST00000456025 225 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 RNU7-59P-201ENST00000459101 61 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 MTND4LP3-201ENST00000468320 276 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 AC116337.2-201ENST00000477662 156 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 RPL23AP41-201ENST00000484754 458 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 SNORA31.15-201ENST00000516771 132 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 RNU6-64P-201ENST00000517119 105 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 AC022616.6-201ENST00000520479 119 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 TRAV28-201ENST00000557548 323 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 AMZ2P1-203ENST00000565833 850 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 AC034105.4-201ENST00000568304 277 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 AC010620.1-201ENST00000601088 1102 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 AL590229.1-201ENST00000603497 542 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 AC015871.2-201ENST00000603605 948 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 MTND4LP5-201ENST00000605152 292 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 AC239868.4-201ENST00000608318 671 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 AC108747.1-201ENST00000609508 535 ntBASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC71LQ8N9Z2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 AC008669.1-201ENST00000565823 2178 ntBASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 AC093536.2-201ENST00000565257 1406 ntBASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 ELL2P3-201ENST00000457883 1602 ntBASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 U3.4-201ENST00000363352 213 ntBASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 MIR200C-201ENST00000384980 68 ntBASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 PTMAP2-201ENST00000397627 327 ntBASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 RNU6-193P-201ENST00000410977 107 ntBASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 AL513331.1-201ENST00000411908 397 ntBASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 AL353777.1-201ENST00000425552 326 ntBASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 AC010153.1-201ENST00000432862 727 ntBASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 TIMM9P1-201ENST00000436122 256 ntBASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 AL513043.1-201ENST00000439124 535 ntBASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 Z82210.1-201ENST00000440037 231 ntBASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 MTND2P4-201ENST00000445034 1004 ntBASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 MTATP6P26-201ENST00000445926 662 ntBASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 PDSS1P2-201ENST00000449397 678 ntBASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 RNU6-1282P-201ENST00000516735 96 ntBASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 RNU6-201P-201ENST00000517100 61 ntBASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 RNU1-45P-201ENST00000517191 141 ntBASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC71LQ8N9Z2 AC007115.1-201ENST00000546853 234 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms