Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MRPS36P2-201ENST00000512569 299 ntBASIC1.58□□□□□ -2.16
VPS8Q8N3P4 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.58□□□□□ -2.16
VPS8Q8N3P4 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.58□□□□□ -2.16
VPS8Q8N3P4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.58□□□□□ -2.16
VPS8Q8N3P4 AC073111.2-201ENST00000605657 1075 ntBASIC1.58□□□□□ -2.16
VPS8Q8N3P4 OR6C66P-201ENST00000414917 930 ntBASIC1.57□□□□□ -2.16
VPS8Q8N3P4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.57□□□□□ -2.16
VPS8Q8N3P4 AIMP1P2-201ENST00000425294 312 ntBASIC1.57□□□□□ -2.16
VPS8Q8N3P4 USP12PX-201ENST00000432383 1057 ntBASIC1.57□□□□□ -2.16
VPS8Q8N3P4 AC093155.1-201ENST00000440164 826 ntBASIC1.57□□□□□ -2.16
VPS8Q8N3P4 AL357134.1-201ENST00000445848 426 ntBASIC1.57□□□□□ -2.16
VPS8Q8N3P4 AC005297.2-201ENST00000450430 606 ntBASIC1.57□□□□□ -2.16
VPS8Q8N3P4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.57□□□□□ -2.16
VPS8Q8N3P4 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.57□□□□□ -2.16
VPS8Q8N3P4 PRELID3BP4-201ENST00000515476 571 ntBASIC1.57□□□□□ -2.16
VPS8Q8N3P4 RN7SKP265-201ENST00000516448 223 ntBASIC1.57□□□□□ -2.16
VPS8Q8N3P4 AC005034.5-201ENST00000604219 466 ntBASIC1.57□□□□□ -2.16
VPS8Q8N3P4 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
VPS8Q8N3P4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.57□□□□□ -2.16
VPS8Q8N3P4 SDAD1P2-201ENST00000441308 2028 ntBASIC1.57□□□□□ -2.16
VPS8Q8N3P4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
VPS8Q8N3P4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.57□□□□□ -2.16
VPS8Q8N3P4 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.57□□□□□ -2.16
VPS8Q8N3P4 SNORD14B-201ENST00000364533 90 ntBASIC1.57□□□□□ -2.16
VPS8Q8N3P4 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
VPS8Q8N3P4 AL512604.1-201ENST00000404812 257 ntBASIC1.57□□□□□ -2.16
VPS8Q8N3P4 AL500527.1-201ENST00000448532 255 ntBASIC1.57□□□□□ -2.16
VPS8Q8N3P4 AC087588.1-201ENST00000462203 316 ntBASIC1.57□□□□□ -2.16
VPS8Q8N3P4 AC096751.1-202ENST00000502691 1067 ntBASIC1.57□□□□□ -2.16
VPS8Q8N3P4 AC022880.1-201ENST00000534017 973 ntBASIC1.57□□□□□ -2.16
VPS8Q8N3P4 CYCSP2-201ENST00000558168 301 ntBASIC1.57□□□□□ -2.16
VPS8Q8N3P4 AC090888.1-201ENST00000561335 1141 ntBASIC1.57□□□□□ -2.16
VPS8Q8N3P4 AC083806.3-201ENST00000614016 455 ntBASIC1.57□□□□□ -2.16
VPS8Q8N3P4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
VPS8Q8N3P4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
VPS8Q8N3P4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.56□□□□□ -2.16
VPS8Q8N3P4 RNA5SP258-201ENST00000362750 119 ntBASIC1.56□□□□□ -2.16
VPS8Q8N3P4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.56□□□□□ -2.16
VPS8Q8N3P4 TATDN1P1-201ENST00000414123 891 ntBASIC1.56□□□□□ -2.16
VPS8Q8N3P4 BMI1P1-201ENST00000445879 941 ntBASIC1.56□□□□□ -2.16
VPS8Q8N3P4 RPS29P1-201ENST00000465274 159 ntBASIC1.56□□□□□ -2.16
VPS8Q8N3P4 PABPC1P3-201ENST00000469174 459 ntBASIC1.56□□□□□ -2.16
VPS8Q8N3P4 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.56□□□□□ -2.16
VPS8Q8N3P4 AL109918.3-201ENST00000603072 338 ntBASIC1.56□□□□□ -2.16
VPS8Q8N3P4 AC097468.3-201ENST00000607956 456 ntBASIC1.56□□□□□ -2.16
VPS8Q8N3P4 AC092140.2-201ENST00000618027 521 ntBASIC1.56□□□□□ -2.16
VPS8Q8N3P4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.56□□□□□ -2.16
VPS8Q8N3P4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
VPS8Q8N3P4 RNU6-1249P-201ENST00000363237 111 ntBASIC1.55□□□□□ -2.16
VPS8Q8N3P4 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.55□□□□□ -2.16
VPS8Q8N3P4 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.55□□□□□ -2.16
VPS8Q8N3P4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.55□□□□□ -2.16
VPS8Q8N3P4 RPS27P1-201ENST00000450552 247 ntBASIC1.55□□□□□ -2.16
VPS8Q8N3P4 snoU13.28-201ENST00000459235 104 ntBASIC1.55□□□□□ -2.16
VPS8Q8N3P4 AC112518.2-201ENST00000508565 425 ntBASIC1.55□□□□□ -2.16
VPS8Q8N3P4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.55□□□□□ -2.16
VPS8Q8N3P4 RNU2-19P-201ENST00000517288 84 ntBASIC1.55□□□□□ -2.16
VPS8Q8N3P4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.55□□□□□ -2.16
VPS8Q8N3P4 AL137100.2-201ENST00000555786 315 ntBASIC1.55□□□□□ -2.16
VPS8Q8N3P4 FAM106DP-201ENST00000586416 501 ntBASIC1.55□□□□□ -2.16
VPS8Q8N3P4 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.55□□□□□ -2.16
VPS8Q8N3P4 AC135507.1-201ENST00000607214 561 ntBASIC1.55□□□□□ -2.16
VPS8Q8N3P4 AC103710.4-201ENST00000609301 899 ntBASIC1.55□□□□□ -2.16
VPS8Q8N3P4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.55□□□□□ -2.16
VPS8Q8N3P4 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.55□□□□□ -2.16
VPS8Q8N3P4 MIR3199-2-201ENST00000636243 86 ntBASIC1.55□□□□□ -2.16
VPS8Q8N3P4 AC008568.2-201ENST00000623862 2313 ntBASIC1.55□□□□□ -2.16
VPS8Q8N3P4 Y_RNA.493-201ENST00000384422 102 ntBASIC1.54□□□□□ -2.16
VPS8Q8N3P4 MIR532-201ENST00000385025 91 ntBASIC1.54□□□□□ -2.16
VPS8Q8N3P4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.54□□□□□ -2.16
VPS8Q8N3P4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.54□□□□□ -2.16
VPS8Q8N3P4 RPL23AP6-201ENST00000446637 472 ntBASIC1.54□□□□□ -2.16
VPS8Q8N3P4 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.54□□□□□ -2.16
VPS8Q8N3P4 SUMO2P6-201ENST00000505273 288 ntBASIC1.54□□□□□ -2.16
VPS8Q8N3P4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.54□□□□□ -2.16
VPS8Q8N3P4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.54□□□□□ -2.16
VPS8Q8N3P4 AL161722.3-201ENST00000605789 2983 ntBASIC1.53□□□□□ -2.16
VPS8Q8N3P4 CYCSP33-201ENST00000414485 327 ntBASIC1.53□□□□□ -2.16
VPS8Q8N3P4 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.53□□□□□ -2.16
VPS8Q8N3P4 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.53□□□□□ -2.16
VPS8Q8N3P4 RNU6-1308P-201ENST00000516817 103 ntBASIC1.53□□□□□ -2.16
VPS8Q8N3P4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.53□□□□□ -2.16
VPS8Q8N3P4 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.53□□□□□ -2.16
VPS8Q8N3P4 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.53□□□□□ -2.16
VPS8Q8N3P4 DPRXP5-201ENST00000604662 539 ntBASIC1.53□□□□□ -2.16
VPS8Q8N3P4 AC106052.1-201ENST00000608029 497 ntBASIC1.53□□□□□ -2.16
VPS8Q8N3P4 MIR6788-201ENST00000618842 66 ntBASIC1.53□□□□□ -2.16
VPS8Q8N3P4 RPS3AP24-201ENST00000407896 734 ntBASIC1.52□□□□□ -2.17
VPS8Q8N3P4 SRIP3-201ENST00000413200 219 ntBASIC1.52□□□□□ -2.17
VPS8Q8N3P4 AC092648.1-201ENST00000425870 423 ntBASIC1.52□□□□□ -2.17
VPS8Q8N3P4 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.52□□□□□ -2.17
VPS8Q8N3P4 RPS29P28-201ENST00000446439 141 ntBASIC1.52□□□□□ -2.17
VPS8Q8N3P4 HSPE1P24-201ENST00000450782 238 ntBASIC1.52□□□□□ -2.17
VPS8Q8N3P4 MTND4LP3-201ENST00000468320 276 ntBASIC1.52□□□□□ -2.17
VPS8Q8N3P4 CBX3P3-201ENST00000508108 532 ntBASIC1.52□□□□□ -2.17
VPS8Q8N3P4 AC023141.11-201ENST00000508864 202 ntBASIC1.52□□□□□ -2.17
VPS8Q8N3P4 MRPS33P3-201ENST00000513456 322 ntBASIC1.52□□□□□ -2.17
VPS8Q8N3P4 RNU6-970P-201ENST00000516312 107 ntBASIC1.52□□□□□ -2.17
VPS8Q8N3P4 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.52□□□□□ -2.17
VPS8Q8N3P4 AP005136.1-201ENST00000579765 429 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms