Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 AL136313.1-201ENST00000624804 202 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.45□□□□□ -2.02
SKA3Q8IX90 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SKA3Q8IX90 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.45□□□□□ -2.02
SKA3Q8IX90 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SKA3Q8IX90 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.45□□□□□ -2.02
SKA3Q8IX90 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.45□□□□□ -2.02
SKA3Q8IX90 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.45□□□□□ -2.02
SKA3Q8IX90 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SKA3Q8IX90 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
SKA3Q8IX90 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.44□□□□□ -2.02
SKA3Q8IX90 ZNF271P-202ENST00000465539 1970 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SKA3Q8IX90 RNU5F-7P-201ENST00000363696 115 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SKA3Q8IX90 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.44□□□□□ -2.02
SKA3Q8IX90 RNU4-72P-201ENST00000410754 173 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 RNU6-920P-201ENST00000410926 92 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 AL592148.1-201ENST00000413568 445 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.44□□□□□ -2.02
SKA3Q8IX90 AL645937.1-202ENST00000421799 937 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.44□□□□□ -2.02
SKA3Q8IX90 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.44□□□□□ -2.02
SKA3Q8IX90 AL513043.1-201ENST00000439124 535 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 Z82210.1-201ENST00000440037 231 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 BMI1P1-201ENST00000445879 941 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.44□□□□□ -2.02
SKA3Q8IX90 AC108059.3-201ENST00000456388 214 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 RNU6-420P-201ENST00000458780 107 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 RPS20P22-201ENST00000473700 357 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 AC010631.1-201ENST00000474150 156 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SKA3Q8IX90 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.44□□□□□ -2.02
SKA3Q8IX90 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.44□□□□□ -2.02
SKA3Q8IX90 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SKA3Q8IX90 RAC1P5-201ENST00000512182 576 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 AF131216.2-201ENST00000512316 564 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 RNU6-1003P-201ENST00000517099 105 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 AC007115.1-201ENST00000546853 234 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 ZNF519P3-201ENST00000557158 1032 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 TRAV28-201ENST00000557548 323 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.44□□□□□ -2.02
SKA3Q8IX90 AMZ2P1-203ENST00000565833 850 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 HMGB1P6-201ENST00000569046 646 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 AL049779.4-201ENST00000604500 156 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 AC002064.3-201ENST00000623448 346 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
SKA3Q8IX90 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.44□□□□□ -2.02
SKA3Q8IX90 AL049641.1-201ENST00000441055 1948 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 AC138915.1-201ENST00000565427 1685 ntBASIC2.44□□□□□ -2.02
SKA3Q8IX90 AL355596.1-201ENST00000565399 3996 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SKA3Q8IX90 MIR26A1-201ENST00000362205 77 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 DEFA7P-201ENST00000382676 285 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 RNU6-533P-201ENST00000384144 107 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 RNU6-1035P-201ENST00000384477 107 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 AL359634.1-202ENST00000404721 284 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 AC096664.2-201ENST00000411843 406 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 AL513331.1-201ENST00000411908 397 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 AC107081.1-201ENST00000414975 361 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.43□□□□□ -2.02
SKA3Q8IX90 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.43□□□□□ -2.02
SKA3Q8IX90 HMGN2P30-201ENST00000423237 256 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 AL365203.2-201ENST00000423444 196 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.43□□□□□ -2.02
SKA3Q8IX90 AL353777.1-201ENST00000425552 326 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.43□□□□□ -2.02
SKA3Q8IX90 AC087499.2-201ENST00000432861 149 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 TIMM9P1-201ENST00000436122 256 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 AC129850.1-201ENST00000436203 508 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 BNIP3P2-201ENST00000441221 577 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 MTATP6P30-201ENST00000443540 664 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.43□□□□□ -2.02
SKA3Q8IX90 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.43□□□□□ -2.02
SKA3Q8IX90 EPS15P1-201ENST00000448836 336 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.43□□□□□ -2.02
SKA3Q8IX90 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.43□□□□□ -2.02
SKA3Q8IX90 AC073901.1-201ENST00000462471 408 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 KC877373.1-201ENST00000479066 408 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SKA3Q8IX90 RNA5SP367-201ENST00000516557 118 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 RNA5SP291-201ENST00000517222 105 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 AC022616.6-201ENST00000520479 119 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.43□□□□□ -2.02
SKA3Q8IX90 AC087373.1-201ENST00000524920 491 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.43□□□□□ -2.02
SKA3Q8IX90 AC123904.2-201ENST00000548059 300 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.43□□□□□ -2.02
SKA3Q8IX90 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.43□□□□□ -2.02
SKA3Q8IX90 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.43□□□□□ -2.02
SKA3Q8IX90 HMGB1P14-201ENST00000557424 591 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.43□□□□□ -2.02
SKA3Q8IX90 MIR4293-201ENST00000584305 78 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 AC060766.3-201ENST00000591442 263 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 WISP1-OT1-201ENST00000602893 642 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 AC105129.3-201ENST00000605455 485 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 AC005046.1-201ENST00000608515 625 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 AL391813.2-201ENST00000609113 322 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 AC103710.1-201ENST00000610003 901 ntBASIC2.43□□□□□ -2.02
SKA3Q8IX90 AC090970.3-201ENST00000612566 866 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 189.4 ms