Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 RNU6-834P-201ENST00000362367 110 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 Y_RNA.75-201ENST00000362927 97 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 RNU6-1249P-201ENST00000363237 111 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 Y_RNA.331-201ENST00000365267 102 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 RNU6-211P-201ENST00000384047 107 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 MIR10A-201ENST00000385043 110 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 AL645733.1-201ENST00000402250 217 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 AL357075.1-201ENST00000404107 726 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 MTND4LP9-201ENST00000427694 174 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 AC009237.7-201ENST00000447357 229 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 IGHV5-78-201ENST00000450948 295 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 RPL10P17-201ENST00000453852 316 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 AC093840.1-201ENST00000511599 336 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 RNU6-567P-201ENST00000516746 107 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 AC026951.1-201ENST00000559530 2459 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 NDUFB4P11-201ENST00000560510 395 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 KLKP1-201ENST00000595979 403 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 AL645944.1-201ENST00000603857 493 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 AC074140.1-201ENST00000621617 208 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 AC074101.1-201ENST00000637861 241 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 AL079305.1-201ENST00000623159 3008 ntBASIC5.61□□□□□ -1.51
SCUBE3Q8IX30 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 RNA5SP183-201ENST00000362452 119 ntBASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 RNA5SP361-201ENST00000362686 118 ntBASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 SNORD115-32-201ENST00000364079 82 ntBASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 SNORA56-201ENST00000383966 129 ntBASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 Y_RNA.412-201ENST00000384001 104 ntBASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 RNU6-882P-201ENST00000391025 103 ntBASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 UBA52P6-201ENST00000399822 382 ntBASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 RNA5SP487-201ENST00000410186 122 ntBASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 AL590762.4-201ENST00000425885 253 ntBASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 RPL12P18-201ENST00000437175 325 ntBASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 IFNA11P-201ENST00000446352 526 ntBASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 AP000870.1-201ENST00000472927 406 ntBASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 RPL7AP6-201ENST00000477943 801 ntBASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 AC020890.1-201ENST00000491837 504 ntBASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 PDCD5P2-201ENST00000507570 312 ntBASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 Y_RNA.686-201ENST00000516548 134 ntBASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 AC055872.1-201ENST00000570978 278 ntBASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 AL161798.1-201ENST00000604630 131 ntBASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 MIR6810-201ENST00000622701 70 ntBASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 snoU18.1-201ENST00000629629 71 ntBASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 AC083843.2-201ENST00000568248 6253 ntBASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCUBE3Q8IX30 AL672167.1-205ENST00000641112 3080 ntBASIC5.59□□□□□ -1.51
SCUBE3Q8IX30 AP005432.1-201ENST00000580891 3485 ntBASIC5.59□□□□□ -1.51
SCUBE3Q8IX30 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCUBE3Q8IX30 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
SCUBE3Q8IX30 Y_RNA.121-201ENST00000363309 113 ntBASIC5.59□□□□□ -1.51
SCUBE3Q8IX30 RNU6-1255P-201ENST00000363434 112 ntBASIC5.59□□□□□ -1.51
SCUBE3Q8IX30 RNU6-80P-201ENST00000384195 107 ntBASIC5.59□□□□□ -1.51
SCUBE3Q8IX30 MIR32-201ENST00000384965 70 ntBASIC5.59□□□□□ -1.51
SCUBE3Q8IX30 MIR153-2-201ENST00000385225 87 ntBASIC5.59□□□□□ -1.51
SCUBE3Q8IX30 RNU6-239P-201ENST00000390990 99 ntBASIC5.59□□□□□ -1.51
SCUBE3Q8IX30 RNU2-2P-201ENST00000410396 191 ntBASIC5.59□□□□□ -1.51
SCUBE3Q8IX30 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.59□□□□□ -1.51
SCUBE3Q8IX30 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.59□□□□□ -1.51
SCUBE3Q8IX30 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.59□□□□□ -1.51
SCUBE3Q8IX30 AL353705.4-201ENST00000449661 238 ntBASIC5.59□□□□□ -1.51
SCUBE3Q8IX30 PPIAP21-201ENST00000464473 501 ntBASIC5.59□□□□□ -1.51
SCUBE3Q8IX30 RPSAP50-201ENST00000481955 852 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms