Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC093838.1-201ENST00000613014 469 ntBASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 MTND5P7-201ENST00000413558 1798 ntBASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC60Q8IWA6 AL136360.1-201ENST00000503377 1900 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 AC103988.1-201ENST00000566382 2177 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 RPL9P7-201ENST00000330965 580 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 MIR26A1-201ENST00000362205 77 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 RNU5A-8P-201ENST00000364102 114 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 SNORA14A-201ENST00000364773 135 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 SNORA36C-201ENST00000384289 132 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 RPS4XP3-201ENST00000398541 413 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 AL109755.1-201ENST00000401791 649 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 AC018630.2-202ENST00000422992 927 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 ELOCP30-201ENST00000447108 299 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 RN7SL432P-201ENST00000484057 298 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 AC091965.2-201ENST00000512324 613 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 MIR3921-201ENST00000577308 85 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 AC112191.3-201ENST00000604371 277 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 AC121334.2-201ENST00000605387 271 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 AC068276.1-201ENST00000605793 379 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 AC005046.1-201ENST00000608515 625 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 AP000254.1-201ENST00000609934 520 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 AC090970.3-201ENST00000612566 866 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 AL136313.1-201ENST00000624804 202 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 MIR4275-201ENST00000636486 87 ntBASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC60Q8IWA6 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
CCDC60Q8IWA6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
CCDC60Q8IWA6 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 AC108206.1-201ENST00000570186 4159 ntBASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 RNU6-223P-201ENST00000362830 107 ntBASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 RNY3P10-201ENST00000384764 102 ntBASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 MIR514A1-201ENST00000385133 98 ntBASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 RNU6-278P-201ENST00000390945 109 ntBASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 RPS4XP8-201ENST00000402039 771 ntBASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 FCF1P10-201ENST00000407590 479 ntBASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 Y_RNA.608-201ENST00000410647 95 ntBASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 RPL21P24-201ENST00000413752 448 ntBASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 AL353777.1-201ENST00000425552 326 ntBASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 AC008481.1-201ENST00000463278 396 ntBASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 AC093534.1-201ENST00000504977 132 ntBASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 OR5BM1P-201ENST00000512021 366 ntBASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 AC117532.1-201ENST00000514638 323 ntBASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 FABP5P5-201ENST00000515537 406 ntBASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 RNU6-201P-201ENST00000517100 61 ntBASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 SNORA31.21-201ENST00000517180 77 ntBASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 AL157394.1-201ENST00000562983 1224 ntBASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 AC012414.6-201ENST00000568241 401 ntBASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 NRBF2P5-201ENST00000603087 788 ntBASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 Z69908.1-201ENST00000622603 247 ntBASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 AC090740.1-201ENST00000623193 2262 ntBASIC3.02□□□□□ -1.93
CCDC60Q8IWA6 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC60Q8IWA6 FTLP6-201ENST00000355274 422 ntBASIC3.01□□□□□ -1.93
CCDC60Q8IWA6 RNY4P16-201ENST00000364768 94 ntBASIC3.01□□□□□ -1.93
CCDC60Q8IWA6 TXNP7-201ENST00000406296 293 ntBASIC3.01□□□□□ -1.93
CCDC60Q8IWA6 RN7SKP142-201ENST00000411236 328 ntBASIC3.01□□□□□ -1.93
CCDC60Q8IWA6 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC60Q8IWA6 TMEM167AP1-201ENST00000423409 219 ntBASIC3.01□□□□□ -1.93
CCDC60Q8IWA6 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms