Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MIR493-201ENST00000385254 89 ntBASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 RNU6-328P-201ENST00000390887 106 ntBASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 AP000580.1-201ENST00000404439 358 ntBASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 SUMO1P3-201ENST00000439961 304 ntBASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 AC073587.1-201ENST00000447093 876 ntBASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 NDUFB1P2-201ENST00000449477 176 ntBASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 IGKV2D-19-201ENST00000523346 262 ntBASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 AC007224.1-201ENST00000564410 144 ntBASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 AC091979.2-201ENST00000607514 214 ntBASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 AL365434.2-201ENST00000607979 234 ntBASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 AC023043.4-201ENST00000612081 449 ntBASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 AC114781.5-201ENST00000615297 108 ntBASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 AC092608.2-201ENST00000624427 218 ntBASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 AL732372.2-225ENST00000642124 456 ntBASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 AC104260.2-201ENST00000623551 3497 ntBASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 KPNA2P1-201ENST00000458289 1591 ntBASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 DEFB109C-201ENST00000382575 264 ntBASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 DEFB109B-201ENST00000382656 264 ntBASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 SNORA75B-201ENST00000384053 137 ntBASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 RNU6-890P-201ENST00000384121 107 ntBASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 RNY1P14-201ENST00000384426 108 ntBASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 SNORA70C-201ENST00000384538 135 ntBASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 RNU6-95P-201ENST00000384697 107 ntBASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 SNORA57.1-201ENST00000391227 145 ntBASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 RPL7P37-201ENST00000425095 738 ntBASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 RPL7AP28-201ENST00000464513 571 ntBASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 AC110794.1-201ENST00000505816 425 ntBASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 AC097473.1-201ENST00000508142 408 ntBASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 MRPS35P2-201ENST00000508242 191 ntBASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 RNU6-307P-201ENST00000516743 106 ntBASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 MIR3690-201ENST00000580266 75 ntBASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 AL645944.1-201ENST00000603857 493 ntBASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 AP000787.2-201ENST00000604432 568 ntBASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 AL672296.1-201ENST00000427780 2158 ntBASIC4.97□□□□□ -1.61
NPAS4Q8IUM7 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.96□□□□□ -1.61
NPAS4Q8IUM7 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
NPAS4Q8IUM7 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 Y_RNA.153-201ENST00000363615 91 ntBASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 RNU6-1026P-201ENST00000384465 108 ntBASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 MIR34A-201ENST00000385130 110 ntBASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 TMSB10P2-201ENST00000416049 131 ntBASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 AL158071.1-201ENST00000430315 461 ntBASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 HMGB1P12-201ENST00000438594 598 ntBASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 RPL23AP93-201ENST00000440847 484 ntBASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 AC128713.1-201ENST00000471495 306 ntBASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 AC011005.2-201ENST00000487324 359 ntBASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 AC015911.1-201ENST00000495111 156 ntBASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 RNA5SP165-201ENST00000517142 115 ntBASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 HSPE1P5-201ENST00000561489 272 ntBASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 AL354984.3-201ENST00000604803 325 ntBASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 AC018889.1-201ENST00000605372 397 ntBASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 ARF4P1-201ENST00000605447 541 ntBASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 AC099506.2-201ENST00000623074 221 ntBASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 AC022336.2-201ENST00000568966 2538 ntBASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms