Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.62□□□□□ -1.51
SH3RF1Q7Z6J0 AC072026.1-201ENST00000605023 201 ntBASIC5.62□□□□□ -1.51
SH3RF1Q7Z6J0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.62□□□□□ -1.51
SH3RF1Q7Z6J0 AC009318.2-201ENST00000610917 651 ntBASIC5.62□□□□□ -1.51
SH3RF1Q7Z6J0 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.62□□□□□ -1.51
SH3RF1Q7Z6J0 MIR6830-201ENST00000636015 70 ntBASIC5.62□□□□□ -1.51
SH3RF1Q7Z6J0 Z99571.1-201ENST00000636677 394 ntBASIC5.62□□□□□ -1.51
SH3RF1Q7Z6J0 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SH3RF1Q7Z6J0 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SH3RF1Q7Z6J0 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
SH3RF1Q7Z6J0 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.62□□□□□ -1.51
SH3RF1Q7Z6J0 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SH3RF1Q7Z6J0 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SH3RF1Q7Z6J0 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
SH3RF1Q7Z6J0 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 RNU6-178P-201ENST00000384631 104 ntBASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 MIR301A-201ENST00000385261 86 ntBASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 RNU4-78P-201ENST00000410940 126 ntBASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 AC004975.1-201ENST00000428733 208 ntBASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 RPL23AP22-201ENST00000437556 453 ntBASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 IGHV5-78-201ENST00000450948 295 ntBASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 RPL21P104-201ENST00000464143 478 ntBASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 RN7SKP122-201ENST00000515923 296 ntBASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 CASP1P1-201ENST00000526345 212 ntBASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 AP001880.2-201ENST00000538233 448 ntBASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 AC068724.3-201ENST00000625906 87 ntBASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.61□□□□□ -1.51
SH3RF1Q7Z6J0 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 AC139713.2-214ENST00000642059 1811 ntBASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 AC007685.1-201ENST00000329806 452 ntBASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 Y_RNA.8-201ENST00000362353 102 ntBASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 RNU6-263P-201ENST00000363811 107 ntBASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 Y_RNA.626-201ENST00000411288 95 ntBASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 RPS26P47-201ENST00000427219 348 ntBASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 RPL7AP28-201ENST00000464513 571 ntBASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 AC026402.1-201ENST00000513642 170 ntBASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 RNU1-86P-201ENST00000516108 154 ntBASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 RNU1-107P-201ENST00000516617 154 ntBASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 Y_RNA.706-201ENST00000516933 99 ntBASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 MTND5P41-201ENST00000517498 206 ntBASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 MIR4715-201ENST00000584117 79 ntBASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 AC034102.8-201ENST00000615146 484 ntBASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 AC007785.2-201ENST00000598627 1916 ntBASIC5.6□□□□□ -1.51
SH3RF1Q7Z6J0 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 Y_RNA.44-201ENST00000362676 108 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 RNU6-37P-201ENST00000362692 107 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 RNU6-11P-201ENST00000364234 107 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 RNU6-7-201ENST00000364784 107 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 RNU6-290P-201ENST00000365212 101 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 RNU6-8-201ENST00000365467 107 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 RNU6-25P-201ENST00000383873 107 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 RNU6-1-201ENST00000383898 107 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 RNU6-36P-201ENST00000384172 107 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 RNU6-4P-201ENST00000384205 107 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 RNU6-5P-201ENST00000384238 107 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 RNU6-3P-201ENST00000384314 107 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 RNU6-16P-201ENST00000384385 107 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 RNU6-15P-201ENST00000384534 107 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 RNU6-2-201ENST00000384627 107 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 RNU6-29P-201ENST00000384637 107 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 RNU6-9-201ENST00000384776 107 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 RNU6-1154P-201ENST00000391001 104 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 OR2AH1P-201ENST00000425717 928 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 AC093414.1-201ENST00000434712 514 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 AL031659.1-201ENST00000447075 539 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 AL354714.3-201ENST00000447284 493 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 COX6CP14-201ENST00000469580 174 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 RNU6-1315P-201ENST00000517187 99 ntBASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.59□□□□□ -1.51
SH3RF1Q7Z6J0 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms