Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.32□□□□□ -1.88
USP43Q70EL4 AC083798.1-201ENST00000472671 131 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 AC010301.1-201ENST00000473936 355 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 AC090096.1-201ENST00000489168 390 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 AC090453.1-201ENST00000495560 436 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.32□□□□□ -1.88
USP43Q70EL4 AC005921.1-201ENST00000510589 286 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 AC005741.1-201ENST00000511094 432 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 AC022616.6-201ENST00000520479 119 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.32□□□□□ -1.88
USP43Q70EL4 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.32□□□□□ -1.88
USP43Q70EL4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.32□□□□□ -1.88
USP43Q70EL4 AC023050.3-201ENST00000541142 333 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 AC018630.1-201ENST00000541376 925 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.32□□□□□ -1.88
USP43Q70EL4 CYCSP30-201ENST00000546447 172 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 SCOCP1-201ENST00000554676 349 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.32□□□□□ -1.88
USP43Q70EL4 AC120057.2-201ENST00000571520 271 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 AC100830.2-201ENST00000581636 240 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 MAGOH2P-202ENST00000584384 429 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 AL133215.3-201ENST00000609801 448 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 AC009248.2-201ENST00000619826 254 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 AC006065.5-201ENST00000623427 349 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.32□□□□□ -1.88
USP43Q70EL4 AL732372.2-225ENST00000642124 456 ntBASIC3.32□□□□□ -1.88
USP43Q70EL4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.32□□□□□ -1.88
USP43Q70EL4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
USP43Q70EL4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
USP43Q70EL4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP43Q70EL4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
USP43Q70EL4 AC090337.1-201ENST00000579651 2074 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 CKAP2P1-201ENST00000555477 2049 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
USP43Q70EL4 SNORA63.1-201ENST00000362493 131 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 RNA5SP119-201ENST00000362715 117 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 RNU6-1309P-201ENST00000363305 108 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 RNU4-1-201ENST00000363925 141 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 RNA5SP189-201ENST00000364920 115 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 Y_RNA.395-201ENST00000383945 109 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 RNU6-730P-201ENST00000383954 104 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 RNU6-213P-201ENST00000384051 104 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 MT-TG-201ENST00000387429 68 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 SNORA48.8-201ENST00000391324 134 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 RPS4XP8-201ENST00000402039 771 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 AL603908.1-201ENST00000406098 201 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 RNU6-1068P-201ENST00000410958 103 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 RNA5SP31-201ENST00000411144 127 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 RN7SKP140-201ENST00000411196 284 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.31□□□□□ -1.88
USP43Q70EL4 NDUFB4P5-201ENST00000415445 361 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 AC114482.1-201ENST00000418010 247 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 MTCYBP8-201ENST00000422855 651 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 RPL35AP12-201ENST00000425362 338 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 AL353777.1-201ENST00000425552 326 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 AL691449.1-201ENST00000426570 421 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 OR51AB1P-201ENST00000429046 620 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 YME1L1P1-201ENST00000429435 297 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 AL445584.1-201ENST00000431451 330 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.31□□□□□ -1.88
USP43Q70EL4 GOT2P5-201ENST00000433995 546 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 MRPS18BP2-201ENST00000434310 759 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 CYCSP43-201ENST00000438233 310 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 Z98949.2-201ENST00000440996 144 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 NOTCH2P1-201ENST00000443481 624 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 FAM103A2P-201ENST00000444122 354 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 AC002381.1-201ENST00000447049 280 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 HMGN2P21-201ENST00000447764 270 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 PRSS3P4-201ENST00000453323 162 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 snoU13.24-201ENST00000458998 104 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.31□□□□□ -1.88
USP43Q70EL4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.31□□□□□ -1.88
USP43Q70EL4 AC023194.1-201ENST00000493084 308 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 RNU6-1137P-201ENST00000517073 99 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 AC068657.1-201ENST00000520807 306 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.31□□□□□ -1.88
USP43Q70EL4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.31□□□□□ -1.88
USP43Q70EL4 AC034105.3-201ENST00000565294 442 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 MIR3149-201ENST00000584629 83 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.31□□□□□ -1.88
USP43Q70EL4 NUTF2P8-201ENST00000604593 363 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 AL365434.2-201ENST00000607979 234 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.31□□□□□ -1.88
USP43Q70EL4 AL355472.4-201ENST00000610233 626 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 BX664608.1-201ENST00000610519 487 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 uc_338.5-201ENST00000611839 155 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.31□□□□□ -1.88
USP43Q70EL4 MIR6864-201ENST00000617935 70 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.31□□□□□ -1.88
USP43Q70EL4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
USP43Q70EL4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
USP43Q70EL4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.31□□□□□ -1.88
USP43Q70EL4 AC107081.3-201ENST00000612715 2034 ntBASIC3.31□□□□□ -1.88
USP43Q70EL4 NUP58P1-201ENST00000502546 1738 ntBASIC3.3□□□□□ -1.88
USP43Q70EL4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
USP43Q70EL4 AL049780.3-201ENST00000624612 1583 ntBASIC3.3□□□□□ -1.88
USP43Q70EL4 XPOTP1-201ENST00000443317 2398 ntBASIC3.3□□□□□ -1.88
USP43Q70EL4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
USP43Q70EL4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms