Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 U8.3-201ENST00000363321 132 ntBASIC0.57□□□□□ -2.32
VPS13CQ709C8 RNA5SP492-201ENST00000411330 114 ntBASIC0.57□□□□□ -2.32
VPS13CQ709C8 IL33-202ENST00000417746 2327 ntTSL 2 BASIC0.57□□□□□ -2.32
VPS13CQ709C8 AC079780.1-201ENST00000428259 207 ntBASIC0.57□□□□□ -2.32
VPS13CQ709C8 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.57□□□□□ -2.32
VPS13CQ709C8 AC010099.1-201ENST00000455434 375 ntBASIC0.57□□□□□ -2.32
VPS13CQ709C8 AC026801.1-201ENST00000497178 464 ntBASIC0.57□□□□□ -2.32
VPS13CQ709C8 MIR5194-201ENST00000582634 120 ntBASIC0.57□□□□□ -2.32
VPS13CQ709C8 MIR4653-201ENST00000585107 83 ntBASIC0.57□□□□□ -2.32
VPS13CQ709C8 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC0.57□□□□□ -2.32
VPS13CQ709C8 MIR4278-201ENST00000636094 69 ntBASIC0.57□□□□□ -2.32
VPS13CQ709C8 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
VPS13CQ709C8 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
VPS13CQ709C8 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
VPS13CQ709C8 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
VPS13CQ709C8 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
VPS13CQ709C8 AC009901.1-201ENST00000506703 541 ntBASIC0.57□□□□□ -2.32
VPS13CQ709C8 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
VPS13CQ709C8 MIR4474-201ENST00000579189 78 ntBASIC0.57□□□□□ -2.32
VPS13CQ709C8 RNU6-43P-201ENST00000384302 107 ntBASIC0.57□□□□□ -2.32
VPS13CQ709C8 HSPE1P26-201ENST00000405341 275 ntBASIC0.57□□□□□ -2.32
VPS13CQ709C8 TRAPPC2P10-201ENST00000415662 323 ntBASIC0.57□□□□□ -2.32
VPS13CQ709C8 HSPE1P1-201ENST00000421494 318 ntBASIC0.57□□□□□ -2.32
VPS13CQ709C8 LSM1P1-201ENST00000438629 273 ntBASIC0.57□□□□□ -2.32
VPS13CQ709C8 AL121769.1-201ENST00000469473 401 ntBASIC0.57□□□□□ -2.32
VPS13CQ709C8 MRPS17P9-201ENST00000511924 393 ntBASIC0.57□□□□□ -2.32
VPS13CQ709C8 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.57□□□□□ -2.32
VPS13CQ709C8 AC006213.5-201ENST00000619673 288 ntBASIC0.57□□□□□ -2.32
VPS13CQ709C8 OR4G3P-201ENST00000633500 913 ntBASIC0.57□□□□□ -2.32
VPS13CQ709C8 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
VPS13CQ709C8 AC004022.2-201ENST00000413824 193 ntBASIC0.56□□□□□ -2.32
VPS13CQ709C8 snoU13.19-201ENST00000459148 104 ntBASIC0.56□□□□□ -2.32
VPS13CQ709C8 RNU6ATAC39P-201ENST00000516309 149 ntBASIC0.56□□□□□ -2.32
VPS13CQ709C8 MIR329-1-201ENST00000385028 80 ntBASIC0.56□□□□□ -2.32
VPS13CQ709C8 RNU6-955P-201ENST00000410497 104 ntBASIC0.56□□□□□ -2.32
VPS13CQ709C8 RNU4-77P-201ENST00000516692 156 ntBASIC0.56□□□□□ -2.32
VPS13CQ709C8 SNORA31.20-201ENST00000517111 133 ntBASIC0.56□□□□□ -2.32
VPS13CQ709C8 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.56□□□□□ -2.32
VPS13CQ709C8 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC0.56□□□□□ -2.32
VPS13CQ709C8 RNU6-146P-201ENST00000384602 108 ntBASIC0.56□□□□□ -2.32
VPS13CQ709C8 RNA5SP25-201ENST00000410815 110 ntBASIC0.56□□□□□ -2.32
VPS13CQ709C8 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.56□□□□□ -2.32
VPS13CQ709C8 RAB9AP2-201ENST00000443911 597 ntBASIC0.56□□□□□ -2.32
VPS13CQ709C8 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.56□□□□□ -2.32
VPS13CQ709C8 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.56□□□□□ -2.32
VPS13CQ709C8 PCNAP1-201ENST00000505363 709 ntBASIC0.56□□□□□ -2.32
VPS13CQ709C8 AC096745.1-201ENST00000509945 370 ntBASIC0.56□□□□□ -2.32
VPS13CQ709C8 MIR4514-201ENST00000581410 57 ntBASIC0.56□□□□□ -2.32
VPS13CQ709C8 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
VPS13CQ709C8 RNA5SP266-201ENST00000410273 108 ntBASIC0.55□□□□□ -2.32
VPS13CQ709C8 RPL21P24-201ENST00000413752 448 ntBASIC0.55□□□□□ -2.32
VPS13CQ709C8 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.55□□□□□ -2.32
VPS13CQ709C8 AC060773.1-201ENST00000421698 310 ntBASIC0.55□□□□□ -2.32
VPS13CQ709C8 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.55□□□□□ -2.32
VPS13CQ709C8 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.55□□□□□ -2.32
VPS13CQ709C8 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.55□□□□□ -2.32
VPS13CQ709C8 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
VPS13CQ709C8 AC087045.1-201ENST00000605856 382 ntBASIC0.55□□□□□ -2.32
VPS13CQ709C8 IL33-203ENST00000456383 2501 ntTSL 5 BASIC0.55□□□□□ -2.32
VPS13CQ709C8 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC0.55□□□□□ -2.32
VPS13CQ709C8 DBF4P1-201ENST00000412976 1892 ntBASIC0.55□□□□□ -2.32
VPS13CQ709C8 CBX3P1-201ENST00000325243 554 ntBASIC0.55□□□□□ -2.32
VPS13CQ709C8 RPS26P56-201ENST00000444468 240 ntBASIC0.55□□□□□ -2.32
VPS13CQ709C8 HMGB3P17-201ENST00000504195 649 ntBASIC0.55□□□□□ -2.32
VPS13CQ709C8 RNU6-758P-201ENST00000516292 89 ntBASIC0.55□□□□□ -2.32
VPS13CQ709C8 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.55□□□□□ -2.32
VPS13CQ709C8 RNA5SP299-201ENST00000391203 116 ntBASIC0.55□□□□□ -2.32
VPS13CQ709C8 MTCO1P43-201ENST00000431831 488 ntBASIC0.55□□□□□ -2.32
VPS13CQ709C8 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.55□□□□□ -2.32
VPS13CQ709C8 RPL9P9-202ENST00000466501 579 ntBASIC0.55□□□□□ -2.32
VPS13CQ709C8 EIF4A1P12-201ENST00000551910 141 ntBASIC0.55□□□□□ -2.32
VPS13CQ709C8 AC010620.1-201ENST00000601088 1102 ntBASIC0.55□□□□□ -2.32
VPS13CQ709C8 AL161912.3-201ENST00000605404 628 ntBASIC0.55□□□□□ -2.32
VPS13CQ709C8 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
VPS13CQ709C8 AC100821.1-201ENST00000523153 2479 ntBASIC0.54□□□□□ -2.32
VPS13CQ709C8 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.54□□□□□ -2.32
VPS13CQ709C8 RPL37P6-202ENST00000464216 403 ntBASIC0.54□□□□□ -2.32
VPS13CQ709C8 SCARNA1-201ENST00000517138 166 ntBASIC0.54□□□□□ -2.32
VPS13CQ709C8 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
VPS13CQ709C8 AC009902.3-201ENST00000606235 2172 ntBASIC0.54□□□□□ -2.32
VPS13CQ709C8 ANAPC10P1-201ENST00000395991 556 ntBASIC0.54□□□□□ -2.32
VPS13CQ709C8 AL355497.1-201ENST00000406262 551 ntBASIC0.54□□□□□ -2.32
VPS13CQ709C8 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.54□□□□□ -2.32
VPS13CQ709C8 RPL30P5-201ENST00000494923 336 ntBASIC0.54□□□□□ -2.32
VPS13CQ709C8 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.54□□□□□ -2.32
VPS13CQ709C8 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.54□□□□□ -2.32
VPS13CQ709C8 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
VPS13CQ709C8 CYP2C61P-201ENST00000604072 290 ntBASIC0.54□□□□□ -2.32
VPS13CQ709C8 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
VPS13CQ709C8 RNU6-496P-201ENST00000516145 99 ntBASIC0.54□□□□□ -2.32
VPS13CQ709C8 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.54□□□□□ -2.32
VPS13CQ709C8 AC009090.3-201ENST00000616553 565 ntBASIC0.54□□□□□ -2.32
VPS13CQ709C8 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.54□□□□□ -2.32
VPS13CQ709C8 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
VPS13CQ709C8 AC068050.1-201ENST00000394891 380 ntBASIC0.53□□□□□ -2.32
VPS13CQ709C8 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC0.53□□□□□ -2.32
VPS13CQ709C8 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC0.53□□□□□ -2.32
VPS13CQ709C8 RPL17P49-201ENST00000443728 411 ntBASIC0.53□□□□□ -2.32
VPS13CQ709C8 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.53□□□□□ -2.32
VPS13CQ709C8 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms