Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 MT-TH-201ENST00000387441 69 ntBASIC3.17□□□□□ -1.9
CTR9Q6PD62 MTCYBP36-201ENST00000404146 440 ntBASIC3.17□□□□□ -1.9
CTR9Q6PD62 AC078974.1-201ENST00000411597 223 ntBASIC3.17□□□□□ -1.9
CTR9Q6PD62 NPM1P11-201ENST00000417106 855 ntBASIC3.17□□□□□ -1.9
CTR9Q6PD62 AC090960.1-201ENST00000421072 306 ntBASIC3.17□□□□□ -1.9
CTR9Q6PD62 PPP1R11P2-201ENST00000423543 382 ntBASIC3.17□□□□□ -1.9
CTR9Q6PD62 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.17□□□□□ -1.9
CTR9Q6PD62 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.17□□□□□ -1.9
CTR9Q6PD62 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.17□□□□□ -1.9
CTR9Q6PD62 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.17□□□□□ -1.9
CTR9Q6PD62 MTND1P30-201ENST00000441241 901 ntBASIC3.17□□□□□ -1.9
CTR9Q6PD62 BMI1P1-201ENST00000445879 941 ntBASIC3.17□□□□□ -1.9
CTR9Q6PD62 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CTR9Q6PD62 AP1S2P1-201ENST00000457344 379 ntBASIC3.17□□□□□ -1.9
CTR9Q6PD62 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CTR9Q6PD62 RN7SL297P-201ENST00000483161 293 ntBASIC3.17□□□□□ -1.9
CTR9Q6PD62 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.17□□□□□ -1.9
CTR9Q6PD62 CBX3P3-201ENST00000508108 532 ntBASIC3.17□□□□□ -1.9
CTR9Q6PD62 AC109464.2-201ENST00000510242 943 ntBASIC3.17□□□□□ -1.9
CTR9Q6PD62 AC116347.2-201ENST00000514912 523 ntBASIC3.17□□□□□ -1.9
CTR9Q6PD62 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.17□□□□□ -1.9
CTR9Q6PD62 SNORA9.3-201ENST00000516383 129 ntBASIC3.17□□□□□ -1.9
CTR9Q6PD62 RNU6-1003P-201ENST00000517099 105 ntBASIC3.17□□□□□ -1.9
CTR9Q6PD62 HMGB1P41-201ENST00000520234 440 ntBASIC3.17□□□□□ -1.9
CTR9Q6PD62 ERHP1-201ENST00000523006 310 ntBASIC3.17□□□□□ -1.9
CTR9Q6PD62 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.17□□□□□ -1.9
CTR9Q6PD62 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.17□□□□□ -1.9
CTR9Q6PD62 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.17□□□□□ -1.9
CTR9Q6PD62 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.17□□□□□ -1.9
CTR9Q6PD62 AC020895.1-201ENST00000595362 272 ntBASIC3.17□□□□□ -1.9
CTR9Q6PD62 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.17□□□□□ -1.9
CTR9Q6PD62 AC095031.1-201ENST00000623685 672 ntBASIC3.17□□□□□ -1.9
CTR9Q6PD62 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
CTR9Q6PD62 AL513185.3-201ENST00000433335 1300 ntBASIC3.17□□□□□ -1.9
CTR9Q6PD62 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
CTR9Q6PD62 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CTR9Q6PD62 Y_RNA.46-201ENST00000362695 102 ntBASIC3.16□□□□□ -1.9
CTR9Q6PD62 SNORA25.6-201ENST00000364121 118 ntBASIC3.16□□□□□ -1.9
CTR9Q6PD62 RNU6-173P-201ENST00000364215 104 ntBASIC3.16□□□□□ -1.9
CTR9Q6PD62 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTR9Q6PD62 SNORA26.8-201ENST00000391306 124 ntBASIC3.16□□□□□ -1.9
CTR9Q6PD62 AL356057.2-201ENST00000403318 432 ntBASIC3.16□□□□□ -1.9
CTR9Q6PD62 CCNG1P1-201ENST00000406783 885 ntBASIC3.16□□□□□ -1.9
CTR9Q6PD62 MTND1P21-201ENST00000412991 285 ntBASIC3.16□□□□□ -1.9
CTR9Q6PD62 HMGN2P30-201ENST00000423237 256 ntBASIC3.16□□□□□ -1.9
CTR9Q6PD62 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.16□□□□□ -1.9
CTR9Q6PD62 AL121871.1-201ENST00000443413 436 ntBASIC3.16□□□□□ -1.9
CTR9Q6PD62 TPT1P14-201ENST00000448018 505 ntBASIC3.16□□□□□ -1.9
CTR9Q6PD62 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.16□□□□□ -1.9
CTR9Q6PD62 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.16□□□□□ -1.9
CTR9Q6PD62 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.16□□□□□ -1.9
CTR9Q6PD62 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.16□□□□□ -1.9
CTR9Q6PD62 RNU4-29P-201ENST00000515943 174 ntBASIC3.16□□□□□ -1.9
CTR9Q6PD62 RNU6-798P-201ENST00000516912 103 ntBASIC3.16□□□□□ -1.9
CTR9Q6PD62 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.16□□□□□ -1.9
CTR9Q6PD62 AC110760.3-201ENST00000598794 467 ntBASIC3.16□□□□□ -1.9
CTR9Q6PD62 AL049779.4-201ENST00000604500 156 ntBASIC3.16□□□□□ -1.9
CTR9Q6PD62 AL355472.4-201ENST00000610233 626 ntBASIC3.16□□□□□ -1.9
CTR9Q6PD62 AC093591.3-201ENST00000634516 308 ntBASIC3.16□□□□□ -1.9
CTR9Q6PD62 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTR9Q6PD62 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CTR9Q6PD62 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTR9Q6PD62 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CTR9Q6PD62 AL136360.1-201ENST00000503377 1900 ntBASIC3.15□□□□□ -1.9
CTR9Q6PD62 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CTR9Q6PD62 RNA5SP393-201ENST00000363423 117 ntBASIC3.15□□□□□ -1.91
CTR9Q6PD62 RNU6-1180P-201ENST00000364935 107 ntBASIC3.15□□□□□ -1.91
CTR9Q6PD62 RNU6-76P-201ENST00000384060 104 ntBASIC3.15□□□□□ -1.91
CTR9Q6PD62 RNU6-809P-201ENST00000384461 107 ntBASIC3.15□□□□□ -1.91
CTR9Q6PD62 MIR196B-201ENST00000384852 84 ntBASIC3.15□□□□□ -1.91
CTR9Q6PD62 RNU6-754P-201ENST00000391166 107 ntBASIC3.15□□□□□ -1.91
CTR9Q6PD62 RPS4XP8-201ENST00000402039 771 ntBASIC3.15□□□□□ -1.91
CTR9Q6PD62 RPS20P2-201ENST00000402520 389 ntBASIC3.15□□□□□ -1.91
CTR9Q6PD62 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.15□□□□□ -1.91
CTR9Q6PD62 CYCSP46-201ENST00000423569 204 ntBASIC3.15□□□□□ -1.91
CTR9Q6PD62 MED14P1-201ENST00000430517 648 ntBASIC3.15□□□□□ -1.91
CTR9Q6PD62 AC118469.1-201ENST00000442943 488 ntBASIC3.15□□□□□ -1.91
CTR9Q6PD62 MTATP6P26-201ENST00000445926 662 ntBASIC3.15□□□□□ -1.91
CTR9Q6PD62 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.15□□□□□ -1.91
CTR9Q6PD62 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.15□□□□□ -1.91
CTR9Q6PD62 AC055855.1-201ENST00000489563 579 ntBASIC3.15□□□□□ -1.91
CTR9Q6PD62 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.15□□□□□ -1.91
CTR9Q6PD62 AC105914.1-201ENST00000511798 226 ntBASIC3.15□□□□□ -1.91
CTR9Q6PD62 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.15□□□□□ -1.91
CTR9Q6PD62 AC060788.1-201ENST00000521318 469 ntBASIC3.15□□□□□ -1.91
CTR9Q6PD62 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CTR9Q6PD62 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.15□□□□□ -1.91
CTR9Q6PD62 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.15□□□□□ -1.91
CTR9Q6PD62 MIR5697-201ENST00000578045 78 ntBASIC3.15□□□□□ -1.91
CTR9Q6PD62 TPMTP1-201ENST00000592307 737 ntBASIC3.15□□□□□ -1.91
CTR9Q6PD62 AC012065.4-201ENST00000602445 679 ntBASIC3.15□□□□□ -1.91
CTR9Q6PD62 AL356575.1-201ENST00000603008 283 ntBASIC3.15□□□□□ -1.91
CTR9Q6PD62 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.15□□□□□ -1.91
CTR9Q6PD62 AC009268.2-201ENST00000621925 457 ntBASIC3.15□□□□□ -1.91
CTR9Q6PD62 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.15□□□□□ -1.91
CTR9Q6PD62 FO624990.1-201ENST00000636373 85 ntBASIC3.15□□□□□ -1.91
CTR9Q6PD62 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CTR9Q6PD62 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CTR9Q6PD62 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CTR9Q6PD62 RNY4P24-201ENST00000362735 96 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms