Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 BDP1P-201ENST00000582658 1990 ntBASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 THAP12P5-201ENST00000405864 2275 ntBASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 AC091812.1-201ENST00000432235 1948 ntBASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.52□□□□□ -1.69
CNKSR3Q6P9H4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 RNA5SP124-201ENST00000362739 110 ntBASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 RNU6-266P-201ENST00000364225 107 ntBASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 Y_RNA.485-201ENST00000384395 102 ntBASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 AL136372.1-201ENST00000403060 228 ntBASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 RNU6-1050P-201ENST00000410388 107 ntBASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 EIF4EP1-201ENST00000422311 642 ntBASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 SNAP23P1-201ENST00000433229 246 ntBASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 RPS15AP27-201ENST00000449183 343 ntBASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 SCARNA18-201ENST00000459004 134 ntBASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 AC092451.1-201ENST00000480211 153 ntBASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 AC104806.1-201ENST00000508720 308 ntBASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 RNU6-408P-201ENST00000515910 100 ntBASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 RNA5SP360-201ENST00000516555 118 ntBASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 Y_RNA.708-201ENST00000516950 96 ntBASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 AC069200.1-201ENST00000609511 323 ntBASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 AL121772.2-201ENST00000614331 297 ntBASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 MIR8069-1-201ENST00000616627 86 ntBASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 PISRT1.1-201ENST00000616930 107 ntBASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 MIR8069-2-201ENST00000621412 86 ntBASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CNKSR3Q6P9H4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 RNU6-562P-201ENST00000362731 107 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 RNU6-1287P-201ENST00000362914 107 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 RNU6-490P-201ENST00000362985 107 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 RNU5E-6P-201ENST00000365574 115 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 RNU6-1062P-201ENST00000383908 107 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 RNU6-213P-201ENST00000384051 104 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 RNU6-339P-201ENST00000384310 107 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 RNU6-1127P-201ENST00000384580 107 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 RNU6-1060P-201ENST00000384664 107 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 MIR124-3-201ENST00000384866 87 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 MIR7-3-201ENST00000384898 110 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 RNA5SP219-201ENST00000390940 113 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 RNU6-823P-201ENST00000391042 103 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 Y_RNA.594-201ENST00000410373 140 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 AL590632.1-201ENST00000424289 371 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 OR2AH1P-201ENST00000425717 928 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 RPL23AP83-201ENST00000434984 473 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 NOTCH2P1-201ENST00000443481 624 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 AC016696.1-201ENST00000446949 318 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 AL139099.1-201ENST00000497398 403 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 FAM60DP-201ENST00000524174 632 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 GNAI2P1-201ENST00000541815 315 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 AC018462.2-201ENST00000605375 395 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 U2.22-201ENST00000636441 106 ntBASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CNKSR3Q6P9H4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms