Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC087465.1-201ENST00000560574 245 ntBASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 AC008269.2-201ENST00000561915 1105 ntBASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 SNORA23-201ENST00000365128 182 ntBASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 RN7SKP179-201ENST00000516126 217 ntBASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.57□□□□□ -2.32
VPS13DQ5THJ4 USP9YP33-201ENST00000412220 421 ntBASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 CYCSP23-201ENST00000519781 313 ntBASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 SNRPGP15-201ENST00000600149 222 ntBASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 HMGN2P21-201ENST00000447764 270 ntBASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 RNU6-351P-201ENST00000516097 100 ntBASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 HSPE1P4-201ENST00000550617 308 ntBASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 AC068831.7-201ENST00000616954 363 ntBASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 AC025263.3-201ENST00000622965 1396 ntBASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 MIR26B-201ENST00000362251 77 ntBASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 SNORD114-2-201ENST00000363953 78 ntBASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 RNA5SP499-201ENST00000363982 119 ntBASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 RNU6-198P-201ENST00000384258 104 ntBASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 JTBP1-201ENST00000441314 247 ntBASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 RNA5SP337-201ENST00000517007 109 ntBASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 HMGB1P46-201ENST00000520062 610 ntBASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.56□□□□□ -2.32
VPS13DQ5THJ4 CBX3P1-201ENST00000325243 554 ntBASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 Y_RNA.60-201ENST00000362831 98 ntBASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 RNU6-939P-201ENST00000384634 107 ntBASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 SDAD1P3-201ENST00000427380 333 ntBASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 AC008749.1-201ENST00000597650 306 ntBASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 AC019070.1-201ENST00000415008 1024 ntBASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 TPT1P8-201ENST00000510120 555 ntBASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 ERHP1-201ENST00000523006 310 ntBASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 DUXAP11-201ENST00000603858 526 ntBASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 AC007785.2-201ENST00000598627 1916 ntBASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 RNU6-17P-201ENST00000384245 107 ntBASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 RNU6-18P-201ENST00000384527 107 ntBASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 AP002784.2-201ENST00000397300 549 ntBASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 AL353718.1-201ENST00000451028 517 ntBASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 AC097493.1-201ENST00000463958 372 ntBASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 AP001960.1-201ENST00000506494 658 ntBASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 AC103810.9-201ENST00000606688 112 ntBASIC0.55□□□□□ -2.32
VPS13DQ5THJ4 AC098934.3-201ENST00000430450 190 ntBASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 RNA5SP468-201ENST00000516782 93 ntBASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 AL109918.3-201ENST00000603072 338 ntBASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 AC006065.5-201ENST00000623427 349 ntBASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 AC008163.1-202ENST00000636004 2889 ntBASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 RNA5SP276-201ENST00000362580 94 ntBASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 AL591034.1-201ENST00000407447 340 ntBASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 AL356867.1-201ENST00000429623 299 ntBASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 AC008669.1-201ENST00000565823 2178 ntBASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 Y_RNA.294-201ENST00000364916 102 ntBASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 CD24P4-201ENST00000382840 243 ntBASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 RPS29P28-201ENST00000446439 141 ntBASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 AC068714.1-201ENST00000559623 800 ntBASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 AC009902.3-201ENST00000606235 2172 ntBASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 SNORD114-23-201ENST00000363536 72 ntBASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 AL512604.1-201ENST00000404812 257 ntBASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 MTCO3P46-201ENST00000425787 232 ntBASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 AL691517.1-201ENST00000440833 1235 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms