Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CTC1Q2NKJ3 OR4F13P-202ENST00000560066 2054 ntBASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 AC008758.3-201ENST00000507003 1829 ntBASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 ZNF826P-207ENST00000622273 1910 ntBASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 RNA5SP455-201ENST00000365190 119 ntBASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 RPL23AP26-201ENST00000412728 464 ntBASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 ABCC13-202ENST00000463099 3842 ntBASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 AC092754.1-201ENST00000472975 479 ntBASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 RPS27AP9-201ENST00000477681 438 ntBASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 ANXA2P1-201ENST00000505539 926 ntBASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 RAC1P5-201ENST00000512182 576 ntBASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 RN7SKP60-201ENST00000516985 239 ntBASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 IGKV1-32-201ENST00000519290 311 ntBASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 AC090281.1-201ENST00000523019 276 ntBASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 AC122688.1-201ENST00000541494 223 ntBASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 AC040958.1-201ENST00000561102 201 ntBASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 AC093591.2-201ENST00000565254 3843 ntBASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 MIR5096-201ENST00000583713 70 ntBASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 AL133393.1-201ENST00000603277 287 ntBASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 AC004825.2-201ENST00000616634 455 ntBASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 BTBD10P1-201ENST00000549824 1352 ntBASIC5.55□□□□□ -1.52
CTC1Q2NKJ3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 THAP12P5-201ENST00000405864 2275 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 SDAD1P1-202ENST00000524156 2051 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 AL031119.1-201ENST00000404707 1879 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 MIR410-201ENST00000362222 80 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 Y_RNA.182-201ENST00000363880 111 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 Y_RNA.238-201ENST00000364441 102 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 Y_RNA.446-201ENST00000384178 104 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 Y_RNA.525-201ENST00000384570 113 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 Y_RNA.563-201ENST00000384707 108 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 RNU6-754P-201ENST00000391166 107 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 AC068287.1-201ENST00000430283 295 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 CEACAMP1-201ENST00000434624 1035 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 AL360271.2-201ENST00000447710 161 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 MRPS10P1-201ENST00000448483 130 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 RN7SL354P-201ENST00000469282 294 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 AC022795.1-201ENST00000473808 480 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 RPS26P21-201ENST00000475397 348 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 AC023424.1-201ENST00000496058 459 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 Y_RNA.694-201ENST00000516677 117 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 RN7SL356P-201ENST00000582228 248 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 AL355812.1-201ENST00000603215 216 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 MIR6758-201ENST00000620653 63 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 AP001005.3-201ENST00000622049 129 ntBASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CTC1Q2NKJ3 AL353796.1-201ENST00000561542 3241 ntBASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 Y_RNA.7-201ENST00000362352 102 ntBASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 SNORA70.2-201ENST00000364506 135 ntBASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 Y_RNA.324-201ENST00000365165 102 ntBASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 Y_RNA.420-201ENST00000384043 110 ntBASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 MIR578-201ENST00000384828 96 ntBASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 RNA5SP241-201ENST00000391326 114 ntBASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 CYCSP33-201ENST00000414485 327 ntBASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 AC011742.1-201ENST00000431448 434 ntBASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 RPL26P6-201ENST00000440913 438 ntBASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 AC079354.2-201ENST00000453523 154 ntBASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 RPS23P7-201ENST00000466210 444 ntBASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
CTC1Q2NKJ3 AC140172.1-201ENST00000502928 141 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms