Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC011233.1-201ENST00000422812 283 ntBASIC2.42□□□□□ -2.02
RAB40BQ12829 AL593851.1-201ENST00000426171 157 ntBASIC2.42□□□□□ -2.02
RAB40BQ12829 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.42□□□□□ -2.02
RAB40BQ12829 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.42□□□□□ -2.02
RAB40BQ12829 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.42□□□□□ -2.02
RAB40BQ12829 MTND1P28-201ENST00000435623 950 ntBASIC2.42□□□□□ -2.02
RAB40BQ12829 MTND5P2-201ENST00000442927 1142 ntBASIC2.42□□□□□ -2.02
RAB40BQ12829 UBBP3-201ENST00000445497 241 ntBASIC2.42□□□□□ -2.02
RAB40BQ12829 RPS15AP27-201ENST00000449183 343 ntBASIC2.42□□□□□ -2.02
RAB40BQ12829 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.42□□□□□ -2.02
RAB40BQ12829 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.42□□□□□ -2.02
RAB40BQ12829 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.42□□□□□ -2.02
RAB40BQ12829 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.42□□□□□ -2.02
RAB40BQ12829 AC112673.1-201ENST00000513168 575 ntBASIC2.42□□□□□ -2.02
RAB40BQ12829 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.42□□□□□ -2.02
RAB40BQ12829 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.42□□□□□ -2.02
RAB40BQ12829 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.42□□□□□ -2.02
RAB40BQ12829 SUB1P1-201ENST00000524415 382 ntBASIC2.42□□□□□ -2.02
RAB40BQ12829 MTND4LP18-201ENST00000526864 291 ntBASIC2.42□□□□□ -2.02
RAB40BQ12829 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.42□□□□□ -2.02
RAB40BQ12829 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.42□□□□□ -2.02
RAB40BQ12829 AC007954.1-201ENST00000554198 494 ntBASIC2.42□□□□□ -2.02
RAB40BQ12829 KC877982.1-201ENST00000602313 470 ntBASIC2.42□□□□□ -2.02
RAB40BQ12829 AC024153.1-201ENST00000603103 365 ntBASIC2.42□□□□□ -2.02
RAB40BQ12829 AP000403.1-201ENST00000603349 851 ntBASIC2.42□□□□□ -2.02
RAB40BQ12829 AL161756.2-201ENST00000604597 246 ntBASIC2.42□□□□□ -2.02
RAB40BQ12829 AC004805.2-201ENST00000605382 482 ntBASIC2.42□□□□□ -2.02
RAB40BQ12829 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.42□□□□□ -2.02
RAB40BQ12829 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.42□□□□□ -2.02
RAB40BQ12829 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.42□□□□□ -2.02
RAB40BQ12829 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.42□□□□□ -2.02
RAB40BQ12829 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.42□□□□□ -2.02
RAB40BQ12829 MTND5P29-201ENST00000458676 1807 ntBASIC2.42□□□□□ -2.02
RAB40BQ12829 PABPC1P9-201ENST00000426076 1612 ntBASIC2.42□□□□□ -2.02
RAB40BQ12829 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RAB40BQ12829 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
RAB40BQ12829 SNORA9-201ENST00000384215 133 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 MIR483-201ENST00000385070 76 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
RAB40BQ12829 NDUFS5P1-201ENST00000405668 289 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 ELOCP17-201ENST00000414751 326 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.41□□□□□ -2.02
RAB40BQ12829 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.41□□□□□ -2.02
RAB40BQ12829 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.41□□□□□ -2.02
RAB40BQ12829 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.41□□□□□ -2.02
RAB40BQ12829 ELOCP14-201ENST00000428070 331 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 AC022018.1-201ENST00000430685 241 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.41□□□□□ -2.02
RAB40BQ12829 RPL22P17-201ENST00000438729 315 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 ELOCP7-201ENST00000439968 331 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 CECR9-201ENST00000453421 199 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.41□□□□□ -2.02
RAB40BQ12829 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.41□□□□□ -2.02
RAB40BQ12829 RPL31P41-201ENST00000477967 372 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 AC068587.2-201ENST00000478386 781 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.41□□□□□ -2.02
RAB40BQ12829 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
RAB40BQ12829 MRPS36P2-201ENST00000512569 299 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.41□□□□□ -2.02
RAB40BQ12829 RNA5SP471-201ENST00000516971 106 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 HMGB1P41-201ENST00000520234 440 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.41□□□□□ -2.02
RAB40BQ12829 AP002404.1-201ENST00000532005 451 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 HSPE1P20-201ENST00000538133 289 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
RAB40BQ12829 AC123904.2-201ENST00000548059 300 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 AC009094.1-201ENST00000564443 426 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 PCMTD1P2-201ENST00000565017 355 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 AC025281.1-201ENST00000567026 265 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 MIR3146-201ENST00000580367 79 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.41□□□□□ -2.02
RAB40BQ12829 AP001981.2-201ENST00000603241 418 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 AC098826.3-201ENST00000603823 466 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 AL161798.1-201ENST00000604630 131 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 AL391813.2-201ENST00000609113 322 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 AC108747.1-201ENST00000609508 535 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RAB40BQ12829 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.41□□□□□ -2.02
RAB40BQ12829 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.41□□□□□ -2.02
RAB40BQ12829 AC009159.1-201ENST00000618386 642 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.41□□□□□ -2.02
RAB40BQ12829 AC017037.3-201ENST00000625016 472 ntBASIC2.41□□□□□ -2.02
RAB40BQ12829 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.41□□□□□ -2.02
RAB40BQ12829 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.41□□□□□ -2.02
RAB40BQ12829 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.41□□□□□ -2.02
RAB40BQ12829 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.41□□□□□ -2.02
RAB40BQ12829 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
RAB40BQ12829 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
RAB40BQ12829 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.4□□□□□ -2.02
RAB40BQ12829 RNU6-501P-201ENST00000364072 100 ntBASIC2.4□□□□□ -2.03
RAB40BQ12829 RNY3P13-201ENST00000365542 102 ntBASIC2.4□□□□□ -2.03
RAB40BQ12829 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.4□□□□□ -2.03
RAB40BQ12829 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.4□□□□□ -2.03
RAB40BQ12829 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.4□□□□□ -2.03
RAB40BQ12829 AL358075.3-201ENST00000426289 226 ntBASIC2.4□□□□□ -2.03
RAB40BQ12829 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.4□□□□□ -2.03
RAB40BQ12829 HMGB1P27-201ENST00000431429 603 ntBASIC2.4□□□□□ -2.03
RAB40BQ12829 AC112220.1-201ENST00000434628 355 ntBASIC2.4□□□□□ -2.03
RAB40BQ12829 RPS15AP5-201ENST00000436276 388 ntBASIC2.4□□□□□ -2.03
RAB40BQ12829 RPS12P2-201ENST00000439728 269 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms