Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AC011998.1-201ENST00000433403 117 ntBASIC4.14□□□□□ -1.75
IRF9Q00978 AL132765.1-201ENST00000434165 553 ntBASIC4.14□□□□□ -1.75
IRF9Q00978 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.14□□□□□ -1.75
IRF9Q00978 MTND4P19-201ENST00000446659 478 ntBASIC4.14□□□□□ -1.75
IRF9Q00978 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.14□□□□□ -1.75
IRF9Q00978 AC130509.1-201ENST00000464158 433 ntBASIC4.14□□□□□ -1.75
IRF9Q00978 RPL7P5-201ENST00000471472 736 ntBASIC4.14□□□□□ -1.75
IRF9Q00978 RN7SL860P-201ENST00000473738 223 ntBASIC4.14□□□□□ -1.75
IRF9Q00978 AF213884.1-201ENST00000488102 463 ntBASIC4.14□□□□□ -1.75
IRF9Q00978 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.14□□□□□ -1.75
IRF9Q00978 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.14□□□□□ -1.75
IRF9Q00978 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.14□□□□□ -1.75
IRF9Q00978 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.14□□□□□ -1.75
IRF9Q00978 SNORA31.8-201ENST00000516327 108 ntBASIC4.14□□□□□ -1.75
IRF9Q00978 RNU6-1315P-201ENST00000517187 99 ntBASIC4.14□□□□□ -1.75
IRF9Q00978 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.14□□□□□ -1.75
IRF9Q00978 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.14□□□□□ -1.75
IRF9Q00978 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.14□□□□□ -1.75
IRF9Q00978 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.14□□□□□ -1.75
IRF9Q00978 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
IRF9Q00978 MIR5690-201ENST00000583739 73 ntBASIC4.14□□□□□ -1.75
IRF9Q00978 MIR3171-201ENST00000584270 74 ntBASIC4.14□□□□□ -1.75
IRF9Q00978 AC068790.4-201ENST00000602474 263 ntBASIC4.14□□□□□ -1.75
IRF9Q00978 AL080274.1-201ENST00000605565 220 ntBASIC4.14□□□□□ -1.75
IRF9Q00978 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.14□□□□□ -1.75
IRF9Q00978 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.14□□□□□ -1.75
IRF9Q00978 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.14□□□□□ -1.75
IRF9Q00978 AC010378.1-201ENST00000619270 362 ntBASIC4.14□□□□□ -1.75
IRF9Q00978 Z82217.1-201ENST00000625157 8149 ntBASIC4.14□□□□□ -1.75
IRF9Q00978 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
IRF9Q00978 MARK2P15-201ENST00000432204 2186 ntBASIC4.14□□□□□ -1.75
IRF9Q00978 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
IRF9Q00978 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
IRF9Q00978 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.13□□□□□ -1.75
IRF9Q00978 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.13□□□□□ -1.75
IRF9Q00978 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
IRF9Q00978 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.13□□□□□ -1.75
IRF9Q00978 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
IRF9Q00978 RNU1-14P-201ENST00000362759 152 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 Y_RNA.146-201ENST00000363549 102 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 RNU1-32P-201ENST00000363937 159 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 RNU6-474P-201ENST00000384243 107 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 MIR301A-201ENST00000385261 86 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 AL391417.1-201ENST00000404100 426 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.13□□□□□ -1.75
IRF9Q00978 Z85995.1-201ENST00000415547 335 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
IRF9Q00978 ATG3P1-201ENST00000419507 911 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.13□□□□□ -1.75
IRF9Q00978 RPL7P28-201ENST00000437739 740 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 AL359672.1-201ENST00000442302 409 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 RPS24P13-201ENST00000442520 397 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.13□□□□□ -1.75
IRF9Q00978 NDUFS5P3-201ENST00000450668 321 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 Y_RNA.653-201ENST00000459091 95 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 Y_RNA.631-201ENST00000459607 101 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 HMGN1P10-201ENST00000474557 553 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
IRF9Q00978 RN7SL481P-201ENST00000477764 299 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 RN7SL691P-201ENST00000494487 301 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 CEACAMP10-202ENST00000495431 496 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.13□□□□□ -1.75
IRF9Q00978 AC026801.1-201ENST00000497178 464 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.13□□□□□ -1.75
IRF9Q00978 MTND3P25-201ENST00000509243 135 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 AC093303.1-201ENST00000514549 295 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 RNA5SP73-201ENST00000516744 108 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.13□□□□□ -1.75
IRF9Q00978 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.13□□□□□ -1.75
IRF9Q00978 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.13□□□□□ -1.75
IRF9Q00978 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.13□□□□□ -1.75
IRF9Q00978 AC004024.1-201ENST00000549244 247 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.13□□□□□ -1.75
IRF9Q00978 MIR378J-201ENST00000611988 109 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 AC098657.3-201ENST00000620434 263 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 AC112200.1-201ENST00000625015 234 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 MIR7641-1-201ENST00000627518 61 ntBASIC4.13□□□□□ -1.75
IRF9Q00978 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.13□□□□□ -1.75
IRF9Q00978 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
IRF9Q00978 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
IRF9Q00978 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
IRF9Q00978 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
IRF9Q00978 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
IRF9Q00978 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.12□□□□□ -1.75
IRF9Q00978 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
IRF9Q00978 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
IRF9Q00978 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.12□□□□□ -1.75
IRF9Q00978 MTCO1P12-201ENST00000414273 1543 ntBASIC4.12□□□□□ -1.75
IRF9Q00978 Y_RNA.187-201ENST00000363918 113 ntBASIC4.12□□□□□ -1.75
IRF9Q00978 MIR559-201ENST00000385188 96 ntBASIC4.12□□□□□ -1.75
IRF9Q00978 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
IRF9Q00978 RPL5P18-201ENST00000406671 891 ntBASIC4.12□□□□□ -1.75
IRF9Q00978 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.12□□□□□ -1.75
IRF9Q00978 AL590632.1-201ENST00000424289 371 ntBASIC4.12□□□□□ -1.75
IRF9Q00978 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.12□□□□□ -1.75
IRF9Q00978 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.12□□□□□ -1.75
IRF9Q00978 AL451050.1-201ENST00000450126 415 ntBASIC4.12□□□□□ -1.75
IRF9Q00978 MRPS31P2-201ENST00000451581 518 ntBASIC4.12□□□□□ -1.75
IRF9Q00978 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.12□□□□□ -1.75
IRF9Q00978 AC109327.1-201ENST00000471666 403 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms