Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.71□□□□□ -2.14
HOXC5Q00444 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.71□□□□□ -2.14
HOXC5Q00444 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.71□□□□□ -2.14
HOXC5Q00444 MIR4637-201ENST00000582405 84 ntBASIC1.71□□□□□ -2.14
HOXC5Q00444 AL596245.1-201ENST00000618994 362 ntBASIC1.71□□□□□ -2.14
HOXC5Q00444 AC004520.1-201ENST00000608362 1413 ntBASIC1.71□□□□□ -2.14
HOXC5Q00444 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.71□□□□□ -2.14
HOXC5Q00444 AC022336.2-201ENST00000568966 2538 ntBASIC1.7□□□□□ -2.14
HOXC5Q00444 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.7□□□□□ -2.14
HOXC5Q00444 U8.2-201ENST00000363156 134 ntBASIC1.7□□□□□ -2.14
HOXC5Q00444 RNU5B-1-201ENST00000363286 116 ntBASIC1.7□□□□□ -2.14
HOXC5Q00444 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.7□□□□□ -2.14
HOXC5Q00444 RNU6-354P-201ENST00000383862 107 ntBASIC1.7□□□□□ -2.14
HOXC5Q00444 RNU6-610P-201ENST00000384264 107 ntBASIC1.7□□□□□ -2.14
HOXC5Q00444 GSTA9P-201ENST00000406231 611 ntBASIC1.7□□□□□ -2.14
HOXC5Q00444 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.7□□□□□ -2.14
HOXC5Q00444 SEPT7P5-201ENST00000434048 306 ntBASIC1.7□□□□□ -2.14
HOXC5Q00444 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.7□□□□□ -2.14
HOXC5Q00444 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.7□□□□□ -2.14
HOXC5Q00444 FABP5P13-201ENST00000452144 328 ntBASIC1.7□□□□□ -2.14
HOXC5Q00444 AC072039.1-201ENST00000477611 581 ntBASIC1.7□□□□□ -2.14
HOXC5Q00444 AC007182.2-201ENST00000489251 402 ntBASIC1.7□□□□□ -2.14
HOXC5Q00444 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.7□□□□□ -2.14
HOXC5Q00444 RN7SKP31-201ENST00000516354 278 ntBASIC1.7□□□□□ -2.14
HOXC5Q00444 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HOXC5Q00444 AC118942.1-201ENST00000529674 1035 ntBASIC1.7□□□□□ -2.14
HOXC5Q00444 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.7□□□□□ -2.14
HOXC5Q00444 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.7□□□□□ -2.14
HOXC5Q00444 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.7□□□□□ -2.14
HOXC5Q00444 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.7□□□□□ -2.14
HOXC5Q00444 AC068790.3-201ENST00000602988 553 ntBASIC1.7□□□□□ -2.14
HOXC5Q00444 AC021749.1-201ENST00000604322 607 ntBASIC1.7□□□□□ -2.14
HOXC5Q00444 AL161729.4-201ENST00000604650 476 ntBASIC1.7□□□□□ -2.14
HOXC5Q00444 AL390208.1-201ENST00000605885 644 ntBASIC1.7□□□□□ -2.14
HOXC5Q00444 AL583856.2-201ENST00000606298 543 ntBASIC1.7□□□□□ -2.14
HOXC5Q00444 AC025594.3-201ENST00000613068 790 ntBASIC1.7□□□□□ -2.14
HOXC5Q00444 AL118556.2-201ENST00000614375 824 ntBASIC1.7□□□□□ -2.14
HOXC5Q00444 AC087821.2-201ENST00000637086 450 ntBASIC1.7□□□□□ -2.14
HOXC5Q00444 MKKS-204ENST00000639674 192 ntBASIC1.7□□□□□ -2.14
HOXC5Q00444 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.7□□□□□ -2.14
HOXC5Q00444 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HOXC5Q00444 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HOXC5Q00444 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HOXC5Q00444 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HOXC5Q00444 MTND5P29-201ENST00000458676 1807 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
HOXC5Q00444 RNU6-28P-201ENST00000362378 107 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 SNORA16B-201ENST00000364674 135 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 RNA5SP125-201ENST00000364843 120 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 MIR506-201ENST00000384998 124 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 RNU6-750P-201ENST00000390946 107 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 PTGES3P2-201ENST00000407942 482 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.69□□□□□ -2.14
HOXC5Q00444 NPM1P11-201ENST00000417106 855 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 AL445685.2-201ENST00000422551 342 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.69□□□□□ -2.14
HOXC5Q00444 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.69□□□□□ -2.14
HOXC5Q00444 AL451074.3-201ENST00000437709 472 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.69□□□□□ -2.14
HOXC5Q00444 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.69□□□□□ -2.14
HOXC5Q00444 AL136380.1-201ENST00000447970 162 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 SNORA59A-201ENST00000459326 152 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 TRBV12-1-201ENST00000479785 344 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 RPS29P21-201ENST00000496272 170 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 MTCO2P9-201ENST00000503214 694 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.69□□□□□ -2.14
HOXC5Q00444 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.69□□□□□ -2.14
HOXC5Q00444 SNORA31.6-201ENST00000516241 130 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.69□□□□□ -2.14
HOXC5Q00444 MIR3122-201ENST00000577243 73 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.69□□□□□ -2.14
HOXC5Q00444 MIR4648-201ENST00000580107 72 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.69□□□□□ -2.14
HOXC5Q00444 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.69□□□□□ -2.14
HOXC5Q00444 AC010928.2-201ENST00000588017 287 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.69□□□□□ -2.14
HOXC5Q00444 AC008749.1-201ENST00000597650 306 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 AC011451.2-201ENST00000604303 598 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.69□□□□□ -2.14
HOXC5Q00444 AP005229.2-201ENST00000609980 697 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 FTX_3.1-201ENST00000610451 147 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 AC087241.4-201ENST00000612441 480 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 AC010975.3-201ENST00000618727 978 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 AC091932.3-201ENST00000624223 323 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 AL159972.1-201ENST00000625150 448 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.69□□□□□ -2.14
HOXC5Q00444 AC110994.2-201ENST00000635481 492 ntBASIC1.69□□□□□ -2.14
HOXC5Q00444 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
HOXC5Q00444 RNU6-707P-201ENST00000364647 95 ntBASIC1.68□□□□□ -2.14
HOXC5Q00444 MIR17-201ENST00000385012 84 ntBASIC1.68□□□□□ -2.14
HOXC5Q00444 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
HOXC5Q00444 SNORD23.1-201ENST00000408212 104 ntBASIC1.68□□□□□ -2.14
HOXC5Q00444 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.68□□□□□ -2.14
HOXC5Q00444 MTCO2P1-201ENST00000424648 477 ntBASIC1.68□□□□□ -2.14
HOXC5Q00444 DPRXP1-201ENST00000426312 460 ntBASIC1.68□□□□□ -2.14
HOXC5Q00444 AC007560.1-201ENST00000426912 237 ntBASIC1.68□□□□□ -2.14
HOXC5Q00444 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.68□□□□□ -2.14
HOXC5Q00444 OSTCP8-201ENST00000445117 448 ntBASIC1.68□□□□□ -2.14
HOXC5Q00444 AL500527.1-201ENST00000448532 255 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms