Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC007435.1-201ENST00000421086 415 ntBASIC2.55□□□□□ -2
CCNA1P78396 AC007560.1-201ENST00000426912 237 ntBASIC2.55□□□□□ -2
CCNA1P78396 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.55□□□□□ -2
CCNA1P78396 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.55□□□□□ -2
CCNA1P78396 RNU6-1225P-201ENST00000516336 65 ntBASIC2.55□□□□□ -2
CCNA1P78396 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.55□□□□□ -2
CCNA1P78396 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.55□□□□□ -2
CCNA1P78396 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.55□□□□□ -2
CCNA1P78396 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.55□□□□□ -2
CCNA1P78396 AC135628.1-201ENST00000568867 534 ntBASIC2.55□□□□□ -2
CCNA1P78396 AL079343.1-201ENST00000572358 1771 ntBASIC2.55□□□□□ -2
CCNA1P78396 MIR3912-201ENST00000577566 105 ntBASIC2.55□□□□□ -2
CCNA1P78396 AC126365.2-201ENST00000580630 379 ntBASIC2.55□□□□□ -2
CCNA1P78396 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.55□□□□□ -2
CCNA1P78396 AC060766.3-201ENST00000591442 263 ntBASIC2.55□□□□□ -2
CCNA1P78396 AC068620.3-201ENST00000602749 560 ntBASIC2.55□□□□□ -2
CCNA1P78396 AC239868.4-201ENST00000608318 671 ntBASIC2.55□□□□□ -2
CCNA1P78396 AC013562.2-201ENST00000611632 603 ntBASIC2.55□□□□□ -2
CCNA1P78396 AC005332.10-201ENST00000612725 619 ntBASIC2.55□□□□□ -2
CCNA1P78396 AP002791.1-201ENST00000623291 381 ntBASIC2.55□□□□□ -2
CCNA1P78396 CU459211.1-201ENST00000635667 749 ntBASIC2.55□□□□□ -2
CCNA1P78396 MIR7157-201ENST00000635801 60 ntBASIC2.55□□□□□ -2
CCNA1P78396 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.55□□□□□ -2
CCNA1P78396 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.54□□□□□ -2
CCNA1P78396 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.54□□□□□ -2
CCNA1P78396 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.54□□□□□ -2
CCNA1P78396 AC080128.1-201ENST00000474389 1917 ntBASIC2.54□□□□□ -2
CCNA1P78396 AP005901.5-201ENST00000545779 1796 ntBASIC2.54□□□□□ -2
CCNA1P78396 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCNA1P78396 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.54□□□□□ -2
CCNA1P78396 AL161781.1-201ENST00000354277 403 ntBASIC2.54□□□□□ -2
CCNA1P78396 SNORA23-201ENST00000365128 182 ntBASIC2.54□□□□□ -2
CCNA1P78396 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.54□□□□□ -2
CCNA1P78396 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.54□□□□□ -2
CCNA1P78396 GSTA9P-201ENST00000406231 611 ntBASIC2.54□□□□□ -2
CCNA1P78396 AL513331.1-201ENST00000411908 397 ntBASIC2.54□□□□□ -2
CCNA1P78396 USP9YP13-201ENST00000417797 480 ntBASIC2.54□□□□□ -2
CCNA1P78396 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.54□□□□□ -2
CCNA1P78396 MRPS36P1-201ENST00000421291 307 ntBASIC2.54□□□□□ -2
CCNA1P78396 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCNA1P78396 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.54□□□□□ -2
CCNA1P78396 AC027673.1-201ENST00000456245 405 ntBASIC2.54□□□□□ -2
CCNA1P78396 ATG12P2-201ENST00000456830 416 ntBASIC2.54□□□□□ -2
CCNA1P78396 AC073901.1-201ENST00000462471 408 ntBASIC2.54□□□□□ -2
CCNA1P78396 RNU6-583P-201ENST00000516012 92 ntBASIC2.54□□□□□ -2
CCNA1P78396 RNU6-714P-201ENST00000516963 103 ntBASIC2.54□□□□□ -2
CCNA1P78396 NRON-201ENST00000517270 370 ntBASIC2.54□□□□□ -2
CCNA1P78396 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.54□□□□□ -2
CCNA1P78396 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.54□□□□□ -2
CCNA1P78396 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.54□□□□□ -2
CCNA1P78396 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.54□□□□□ -2
CCNA1P78396 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.54□□□□□ -2
CCNA1P78396 AC092574.1-201ENST00000609771 420 ntBASIC2.54□□□□□ -2
CCNA1P78396 AC245884.12-201ENST00000615364 59 ntBASIC2.54□□□□□ -2
CCNA1P78396 AL445264.1-201ENST00000621719 171 ntBASIC2.54□□□□□ -2
CCNA1P78396 AL138713.1-201ENST00000624026 2130 ntBASIC2.54□□□□□ -2
CCNA1P78396 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
CCNA1P78396 MIR21-201ENST00000362134 72 ntBASIC2.53□□□□□ -2
CCNA1P78396 RNU6-97P-201ENST00000363387 104 ntBASIC2.53□□□□□ -2
CCNA1P78396 RNA5SP88-201ENST00000365560 109 ntBASIC2.53□□□□□ -2
CCNA1P78396 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCNA1P78396 RNU2-49P-201ENST00000410666 184 ntBASIC2.53□□□□□ -2
CCNA1P78396 MTND1P21-201ENST00000412991 285 ntBASIC2.53□□□□□ -2
CCNA1P78396 USP12PX-201ENST00000432383 1057 ntBASIC2.53□□□□□ -2
CCNA1P78396 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.53□□□□□ -2
CCNA1P78396 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
CCNA1P78396 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.53□□□□□ -2
CCNA1P78396 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.53□□□□□ -2
CCNA1P78396 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.53□□□□□ -2
CCNA1P78396 AC104629.1-201ENST00000494226 508 ntBASIC2.53□□□□□ -2
CCNA1P78396 AC008427.1-201ENST00000503102 655 ntBASIC2.53□□□□□ -2
CCNA1P78396 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.53□□□□□ -2
CCNA1P78396 AC022447.3-201ENST00000506865 495 ntBASIC2.53□□□□□ -2
CCNA1P78396 AC023141.11-201ENST00000508864 202 ntBASIC2.53□□□□□ -2
CCNA1P78396 AC116337.1-201ENST00000509680 687 ntBASIC2.53□□□□□ -2
CCNA1P78396 HMGB3P3-201ENST00000510526 400 ntBASIC2.53□□□□□ -2
CCNA1P78396 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.53□□□□□ -2
CCNA1P78396 RNU6-991P-201ENST00000516168 107 ntBASIC2.53□□□□□ -2
CCNA1P78396 NDUFS5P6-201ENST00000529136 295 ntBASIC2.53□□□□□ -2
CCNA1P78396 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.53□□□□□ -2
CCNA1P78396 NACAP3-201ENST00000552100 481 ntBASIC2.53□□□□□ -2
CCNA1P78396 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.53□□□□□ -2
CCNA1P78396 AC025811.1-201ENST00000604312 472 ntBASIC2.53□□□□□ -2
CCNA1P78396 MTND4LP5-201ENST00000605152 292 ntBASIC2.53□□□□□ -2
CCNA1P78396 AL353997.5-201ENST00000618886 171 ntBASIC2.53□□□□□ -2
CCNA1P78396 AC068057.2-201ENST00000624047 895 ntBASIC2.53□□□□□ -2
CCNA1P78396 AP003485.1-201ENST00000625093 753 ntBASIC2.53□□□□□ -2
CCNA1P78396 AC126544.2-201ENST00000625174 749 ntBASIC2.53□□□□□ -2
CCNA1P78396 AC099063.3-201ENST00000642066 185 ntBASIC2.53□□□□□ -2
CCNA1P78396 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CCNA1P78396 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
CCNA1P78396 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.52□□□□□ -2.01
CCNA1P78396 MTND5P29-201ENST00000458676 1807 ntBASIC2.52□□□□□ -2.01
CCNA1P78396 RNU6-223P-201ENST00000362830 107 ntBASIC2.52□□□□□ -2.01
CCNA1P78396 RNU6-884P-201ENST00000363889 107 ntBASIC2.52□□□□□ -2.01
CCNA1P78396 DEFA7P-201ENST00000382676 285 ntBASIC2.52□□□□□ -2.01
CCNA1P78396 Y_RNA.578-201ENST00000390903 88 ntBASIC2.52□□□□□ -2.01
CCNA1P78396 MTCO1P56-201ENST00000401674 224 ntBASIC2.52□□□□□ -2.01
CCNA1P78396 CCNG1P1-201ENST00000406783 885 ntBASIC2.52□□□□□ -2.01
CCNA1P78396 MTATP6P19-201ENST00000413797 659 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms