Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MIR34A-201ENST00000385130 110 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 SDHCP2-201ENST00000398565 501 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 AC007560.1-201ENST00000426912 237 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 VDAC1P3-201ENST00000434069 851 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 AC099799.1-201ENST00000439809 192 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 AC011816.1-201ENST00000441346 546 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.16□□□□□ -1.74
GFRA1P56159 ARL2BPP10-201ENST00000446487 531 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.16□□□□□ -1.74
GFRA1P56159 GSTA11P-201ENST00000452866 669 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 AL645939.1-201ENST00000453429 797 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 S100A11P1-201ENST00000477525 312 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.16□□□□□ -1.74
GFRA1P56159 RNU6-764P-201ENST00000516396 105 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
GFRA1P56159 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.16□□□□□ -1.74
GFRA1P56159 TRAV32-201ENST00000553993 340 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.16□□□□□ -1.74
GFRA1P56159 AC209154.1-201ENST00000582156 337 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
GFRA1P56159 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.16□□□□□ -1.74
GFRA1P56159 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.16□□□□□ -1.74
GFRA1P56159 RNU6-6P-201ENST00000606623 107 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 7SK.10-201ENST00000621414 298 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.16□□□□□ -1.74
GFRA1P56159 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
GFRA1P56159 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.16□□□□□ -1.74
GFRA1P56159 OR56B2P-202ENST00000641377 2453 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 AC000123.3-201ENST00000624029 4975 ntBASIC4.15□□□□□ -1.74
GFRA1P56159 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
GFRA1P56159 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.74
GFRA1P56159 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
GFRA1P56159 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.15□□□□□ -1.74
GFRA1P56159 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
GFRA1P56159 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
GFRA1P56159 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
GFRA1P56159 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
GFRA1P56159 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 RNU6-50P-201ENST00000362356 103 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 Y_RNA.80-201ENST00000362996 102 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 RNU6-196P-201ENST00000384315 107 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 Y_RNA.496-201ENST00000384444 101 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 MIR10A-201ENST00000385043 110 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 SNORA40C-201ENST00000391285 128 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 MIR1271-201ENST00000408537 86 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 RNU2-71P-201ENST00000411395 189 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 AC243428.1-201ENST00000421099 264 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 PGBD4P6-201ENST00000421501 610 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 RPEP3-201ENST00000425462 676 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.15□□□□□ -1.75
GFRA1P56159 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.15□□□□□ -1.75
GFRA1P56159 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.15□□□□□ -1.75
GFRA1P56159 ISCUP1-201ENST00000454451 448 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 ANP32BP2-201ENST00000454525 545 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.15□□□□□ -1.75
GFRA1P56159 snoU13.1-201ENST00000459157 104 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 AC116655.1-201ENST00000508324 901 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.15□□□□□ -1.75
GFRA1P56159 RNU6-120P-201ENST00000516077 103 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 SNORA31.19-201ENST00000517079 126 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.15□□□□□ -1.75
GFRA1P56159 GNAI2P1-201ENST00000541815 315 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 AL117187.1-201ENST00000555482 181 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.15□□□□□ -1.75
GFRA1P56159 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.15□□□□□ -1.75
GFRA1P56159 MIR3671-201ENST00000580455 88 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 MIR4273-201ENST00000582824 84 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 MIR4715-201ENST00000584117 79 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 AC018889.1-201ENST00000605372 397 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 AC005014.2-201ENST00000607795 599 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 AL132822.1-201ENST00000617063 513 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 AL162373.1-201ENST00000620433 407 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 Z69720.2-201ENST00000624755 279 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.15□□□□□ -1.75
GFRA1P56159 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
GFRA1P56159 USP8P1-201ENST00000494673 3183 ntBASIC4.15□□□□□ -1.75
GFRA1P56159 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
GFRA1P56159 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.15□□□□□ -1.75
GFRA1P56159 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
GFRA1P56159 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
GFRA1P56159 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.15□□□□□ -1.75
GFRA1P56159 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
GFRA1P56159 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
GFRA1P56159 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.14□□□□□ -1.75
GFRA1P56159 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.14□□□□□ -1.75
GFRA1P56159 SNORA31-201ENST00000362607 130 ntBASIC4.14□□□□□ -1.75
GFRA1P56159 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
GFRA1P56159 AL513475.1-201ENST00000406602 315 ntBASIC4.14□□□□□ -1.75
GFRA1P56159 RNU6-174P-201ENST00000410406 106 ntBASIC4.14□□□□□ -1.75
GFRA1P56159 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.14□□□□□ -1.75
GFRA1P56159 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.14□□□□□ -1.75
GFRA1P56159 AC093151.1-201ENST00000427711 313 ntBASIC4.14□□□□□ -1.75
GFRA1P56159 DNAJC19P7-201ENST00000428811 344 ntBASIC4.14□□□□□ -1.75
GFRA1P56159 SNRPEP4-201ENST00000435815 279 ntBASIC4.14□□□□□ -1.75
GFRA1P56159 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.14□□□□□ -1.75
GFRA1P56159 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.14□□□□□ -1.75
GFRA1P56159 RPL9P32-201ENST00000464118 620 ntBASIC4.14□□□□□ -1.75
GFRA1P56159 AC007991.1-201ENST00000522680 631 ntBASIC4.14□□□□□ -1.75
GFRA1P56159 AP004242.1-201ENST00000533701 349 ntBASIC4.14□□□□□ -1.75
GFRA1P56159 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms