Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC034236.1-201ENST00000469891 373 ntBASIC3.06□□□□□ -1.92
CDH13P55290 AC006483.1-201ENST00000487308 313 ntBASIC3.06□□□□□ -1.92
CDH13P55290 RPL21P129-201ENST00000491732 478 ntBASIC3.06□□□□□ -1.92
CDH13P55290 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.06□□□□□ -1.92
CDH13P55290 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH13P55290 RNU6-928P-201ENST00000516876 104 ntBASIC3.06□□□□□ -1.92
CDH13P55290 RNA5SP290-201ENST00000517133 127 ntBASIC3.06□□□□□ -1.92
CDH13P55290 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.06□□□□□ -1.92
CDH13P55290 AP002963.1-201ENST00000530590 184 ntBASIC3.06□□□□□ -1.92
CDH13P55290 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH13P55290 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH13P55290 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH13P55290 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.06□□□□□ -1.92
CDH13P55290 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.06□□□□□ -1.92
CDH13P55290 AC087883.1-201ENST00000551882 391 ntBASIC3.06□□□□□ -1.92
CDH13P55290 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH13P55290 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.06□□□□□ -1.92
CDH13P55290 MIR3167-201ENST00000579623 85 ntBASIC3.06□□□□□ -1.92
CDH13P55290 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.06□□□□□ -1.92
CDH13P55290 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.06□□□□□ -1.92
CDH13P55290 RSL24D1P11-201ENST00000591045 491 ntBASIC3.06□□□□□ -1.92
CDH13P55290 AC245014.2-201ENST00000603689 287 ntBASIC3.06□□□□□ -1.92
CDH13P55290 AC098826.3-201ENST00000603823 466 ntBASIC3.06□□□□□ -1.92
CDH13P55290 AL161798.1-201ENST00000604630 131 ntBASIC3.06□□□□□ -1.92
CDH13P55290 AC007363.1-201ENST00000604736 620 ntBASIC3.06□□□□□ -1.92
CDH13P55290 AC246785.4-201ENST00000605374 287 ntBASIC3.06□□□□□ -1.92
CDH13P55290 FTX_3.1-201ENST00000610451 147 ntBASIC3.06□□□□□ -1.92
CDH13P55290 AC009509.4-201ENST00000619202 509 ntBASIC3.06□□□□□ -1.92
CDH13P55290 AC093831.2-201ENST00000624393 3427 ntBASIC3.06□□□□□ -1.92
CDH13P55290 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.06□□□□□ -1.92
CDH13P55290 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDH13P55290 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDH13P55290 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDH13P55290 AC103988.1-201ENST00000566382 2177 ntBASIC3.05□□□□□ -1.92
CDH13P55290 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.05□□□□□ -1.92
CDH13P55290 MTND5P19-201ENST00000424872 1794 ntBASIC3.05□□□□□ -1.92
CDH13P55290 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDH13P55290 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDH13P55290 SNORA51.4-201ENST00000364993 124 ntBASIC3.05□□□□□ -1.92
CDH13P55290 SMIM11P1-201ENST00000369586 178 ntBASIC3.05□□□□□ -1.92
CDH13P55290 MIR558-201ENST00000384920 94 ntBASIC3.05□□□□□ -1.92
CDH13P55290 SNORA48.7-201ENST00000391302 135 ntBASIC3.05□□□□□ -1.92
CDH13P55290 AL357075.1-201ENST00000404107 726 ntBASIC3.05□□□□□ -1.92
CDH13P55290 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.05□□□□□ -1.92
CDH13P55290 MRPL50P2-201ENST00000416821 482 ntBASIC3.05□□□□□ -1.92
CDH13P55290 C1DP2-201ENST00000418167 426 ntBASIC3.05□□□□□ -1.92
CDH13P55290 SDCBPP3-201ENST00000419629 891 ntBASIC3.05□□□□□ -1.92
CDH13P55290 AL365338.1-201ENST00000422282 858 ntBASIC3.05□□□□□ -1.92
CDH13P55290 ISCA1P1-201ENST00000426679 387 ntBASIC3.05□□□□□ -1.92
CDH13P55290 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.05□□□□□ -1.92
CDH13P55290 MED13P1-201ENST00000428342 171 ntBASIC3.05□□□□□ -1.92
CDH13P55290 RPL21P40-201ENST00000428586 483 ntBASIC3.05□□□□□ -1.92
CDH13P55290 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH13P55290 AC244505.4-201ENST00000434905 287 ntBASIC3.05□□□□□ -1.92
CDH13P55290 AC005019.1-201ENST00000436455 431 ntBASIC3.05□□□□□ -1.92
CDH13P55290 MTND4P32-201ENST00000437189 1237 ntBASIC3.05□□□□□ -1.92
CDH13P55290 ARPC3P1-201ENST00000437218 533 ntBASIC3.05□□□□□ -1.92
CDH13P55290 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.05□□□□□ -1.92
CDH13P55290 SSXP5-201ENST00000443473 287 ntBASIC3.05□□□□□ -1.92
CDH13P55290 PRDX3P3-201ENST00000447765 522 ntBASIC3.05□□□□□ -1.92
CDH13P55290 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH13P55290 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.05□□□□□ -1.92
CDH13P55290 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH13P55290 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.05□□□□□ -1.92
CDH13P55290 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDH13P55290 ARL4AP2-201ENST00000507378 601 ntBASIC3.05□□□□□ -1.92
CDH13P55290 AC022447.1-201ENST00000515358 464 ntBASIC3.05□□□□□ -1.92
CDH13P55290 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.05□□□□□ -1.92
CDH13P55290 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.05□□□□□ -1.92
CDH13P55290 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.05□□□□□ -1.92
CDH13P55290 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH13P55290 NCAPGP2-201ENST00000557911 754 ntBASIC3.05□□□□□ -1.92
CDH13P55290 AC006362.1-201ENST00000567392 174 ntBASIC3.05□□□□□ -1.92
CDH13P55290 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.05□□□□□ -1.92
CDH13P55290 AC007619.2-201ENST00000605743 379 ntBASIC3.05□□□□□ -1.92
CDH13P55290 AC010678.1-201ENST00000614118 713 ntBASIC3.05□□□□□ -1.92
CDH13P55290 AC072046.2-201ENST00000618366 268 ntBASIC3.05□□□□□ -1.92
CDH13P55290 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.05□□□□□ -1.92
CDH13P55290 AC073308.1-201ENST00000623696 305 ntBASIC3.05□□□□□ -1.92
CDH13P55290 AP003399.1-201ENST00000637534 361 ntBASIC3.05□□□□□ -1.92
CDH13P55290 FAM35CP-201ENST00000554755 2470 ntBASIC3.05□□□□□ -1.92
CDH13P55290 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDH13P55290 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
CDH13P55290 UBE2L2-201ENST00000254302 429 ntBASIC3.04□□□□□ -1.92
CDH13P55290 FTLP6-201ENST00000355274 422 ntBASIC3.04□□□□□ -1.92
CDH13P55290 Y_RNA.51-201ENST00000362725 102 ntBASIC3.04□□□□□ -1.92
CDH13P55290 RNU4-40P-201ENST00000364351 143 ntBASIC3.04□□□□□ -1.92
CDH13P55290 RNU6-169P-201ENST00000365336 107 ntBASIC3.04□□□□□ -1.92
CDH13P55290 DYNLT3P1-201ENST00000378574 347 ntBASIC3.04□□□□□ -1.92
CDH13P55290 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDH13P55290 RNU6-348P-201ENST00000384386 107 ntBASIC3.04□□□□□ -1.92
CDH13P55290 RNU1-101P-201ENST00000391171 127 ntBASIC3.04□□□□□ -1.92
CDH13P55290 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.04□□□□□ -1.92
CDH13P55290 CDK8P2-201ENST00000415020 547 ntBASIC3.04□□□□□ -1.92
CDH13P55290 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDH13P55290 BTF3L4P3-201ENST00000418879 476 ntBASIC3.04□□□□□ -1.92
CDH13P55290 AC099548.1-201ENST00000421443 426 ntBASIC3.04□□□□□ -1.92
CDH13P55290 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDH13P55290 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.04□□□□□ -1.92
CDH13P55290 ISCA1P6-201ENST00000427740 390 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms