Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MIR30E-201ENST00000362104 92 ntBASIC3.31□□□□□ -1.88
CDH12P55289 RNU6-600P-201ENST00000362524 99 ntBASIC3.31□□□□□ -1.88
CDH12P55289 RNU4-20P-201ENST00000365601 151 ntBASIC3.31□□□□□ -1.88
CDH12P55289 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.31□□□□□ -1.88
CDH12P55289 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
CDH12P55289 MIR514A1-201ENST00000385133 98 ntBASIC3.31□□□□□ -1.88
CDH12P55289 MIR607-201ENST00000385241 96 ntBASIC3.31□□□□□ -1.88
CDH12P55289 AL139397.2-201ENST00000404529 772 ntBASIC3.31□□□□□ -1.88
CDH12P55289 SNORA11B-201ENST00000408175 129 ntBASIC3.31□□□□□ -1.88
CDH12P55289 RNU6-55P-201ENST00000411092 107 ntBASIC3.31□□□□□ -1.88
CDH12P55289 RNU6-954P-201ENST00000411355 107 ntBASIC3.31□□□□□ -1.88
CDH12P55289 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.31□□□□□ -1.88
CDH12P55289 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.31□□□□□ -1.88
CDH12P55289 AC068533.1-201ENST00000418542 415 ntBASIC3.31□□□□□ -1.88
CDH12P55289 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.31□□□□□ -1.88
CDH12P55289 AL451054.2-201ENST00000420896 202 ntBASIC3.31□□□□□ -1.88
CDH12P55289 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.31□□□□□ -1.88
CDH12P55289 RPL21P66-201ENST00000426566 466 ntBASIC3.31□□□□□ -1.88
CDH12P55289 AC004975.1-201ENST00000428733 208 ntBASIC3.31□□□□□ -1.88
CDH12P55289 RPS29P7-201ENST00000439662 171 ntBASIC3.31□□□□□ -1.88
CDH12P55289 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.31□□□□□ -1.88
CDH12P55289 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.31□□□□□ -1.88
CDH12P55289 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.31□□□□□ -1.88
CDH12P55289 RPS3AP46-201ENST00000448352 682 ntBASIC3.31□□□□□ -1.88
CDH12P55289 MTND3P10-201ENST00000450967 341 ntBASIC3.31□□□□□ -1.88
CDH12P55289 AL136097.1-201ENST00000456945 913 ntBASIC3.31□□□□□ -1.88
CDH12P55289 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.31□□□□□ -1.88
CDH12P55289 RPL31P13-201ENST00000484151 370 ntBASIC3.31□□□□□ -1.88
CDH12P55289 RPL39P36-201ENST00000490784 156 ntBASIC3.31□□□□□ -1.88
CDH12P55289 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
CDH12P55289 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.31□□□□□ -1.88
CDH12P55289 SNORA31.8-201ENST00000516327 108 ntBASIC3.31□□□□□ -1.88
CDH12P55289 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.31□□□□□ -1.88
CDH12P55289 PSMA2P1-201ENST00000526365 646 ntBASIC3.31□□□□□ -1.88
CDH12P55289 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDH12P55289 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.31□□□□□ -1.88
CDH12P55289 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.31□□□□□ -1.88
CDH12P55289 AC011602.1-201ENST00000546484 331 ntBASIC3.31□□□□□ -1.88
CDH12P55289 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.31□□□□□ -1.88
CDH12P55289 AC005730.3-201ENST00000583067 366 ntBASIC3.31□□□□□ -1.88
CDH12P55289 BDH2P1-201ENST00000602288 736 ntBASIC3.31□□□□□ -1.88
CDH12P55289 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.31□□□□□ -1.88
CDH12P55289 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.31□□□□□ -1.88
CDH12P55289 AL365204.3-201ENST00000612448 685 ntBASIC3.31□□□□□ -1.88
CDH12P55289 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.31□□□□□ -1.88
CDH12P55289 AP003122.6-201ENST00000623831 495 ntBASIC3.31□□□□□ -1.88
CDH12P55289 USP8P1-201ENST00000494673 3183 ntBASIC3.31□□□□□ -1.88
CDH12P55289 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDH12P55289 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDH12P55289 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.3□□□□□ -1.88
CDH12P55289 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH12P55289 OR4G1P-203ENST00000641984 1631 ntBASIC3.3□□□□□ -1.88
CDH12P55289 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDH12P55289 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH12P55289 Y_RNA.86-201ENST00000363020 111 ntBASIC3.3□□□□□ -1.88
CDH12P55289 AP002088.1-201ENST00000382740 395 ntBASIC3.3□□□□□ -1.88
CDH12P55289 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CDH12P55289 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CDH12P55289 RPL32P23-201ENST00000397237 405 ntBASIC3.3□□□□□ -1.88
CDH12P55289 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH12P55289 U3.39-201ENST00000408569 239 ntBASIC3.3□□□□□ -1.88
CDH12P55289 RN7SKP156-201ENST00000410308 342 ntBASIC3.3□□□□□ -1.88
CDH12P55289 RNA5SP118-201ENST00000410385 109 ntBASIC3.3□□□□□ -1.88
CDH12P55289 RNU2-29P-201ENST00000410423 189 ntBASIC3.3□□□□□ -1.88
CDH12P55289 BX323014.1-201ENST00000412876 237 ntBASIC3.3□□□□□ -1.88
CDH12P55289 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH12P55289 AC092809.3-201ENST00000415453 231 ntBASIC3.3□□□□□ -1.88
CDH12P55289 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH12P55289 AC245054.1-201ENST00000420944 258 ntBASIC3.3□□□□□ -1.88
CDH12P55289 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH12P55289 ATP5JP1-201ENST00000431631 322 ntBASIC3.3□□□□□ -1.88
CDH12P55289 TXNP1-201ENST00000441872 371 ntBASIC3.3□□□□□ -1.88
CDH12P55289 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.3□□□□□ -1.88
CDH12P55289 MTND5P20-201ENST00000448677 143 ntBASIC3.3□□□□□ -1.88
CDH12P55289 ELOCP23-201ENST00000452014 332 ntBASIC3.3□□□□□ -1.88
CDH12P55289 NUTF2P7-201ENST00000453086 375 ntBASIC3.3□□□□□ -1.88
CDH12P55289 RPL38P4-201ENST00000502376 214 ntBASIC3.3□□□□□ -1.88
CDH12P55289 AC117522.3-201ENST00000507974 584 ntBASIC3.3□□□□□ -1.88
CDH12P55289 AC104806.1-201ENST00000508720 308 ntBASIC3.3□□□□□ -1.88
CDH12P55289 AC025465.4-201ENST00000513422 638 ntBASIC3.3□□□□□ -1.88
CDH12P55289 RNU6-579P-201ENST00000516879 102 ntBASIC3.3□□□□□ -1.88
CDH12P55289 RNU6-685P-201ENST00000517088 95 ntBASIC3.3□□□□□ -1.88
CDH12P55289 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.3□□□□□ -1.88
CDH12P55289 HSPE1P5-201ENST00000561489 272 ntBASIC3.3□□□□□ -1.88
CDH12P55289 RPL23AP84-201ENST00000571193 464 ntBASIC3.3□□□□□ -1.88
CDH12P55289 AC015917.1-201ENST00000579654 510 ntBASIC3.3□□□□□ -1.88
CDH12P55289 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.3□□□□□ -1.88
CDH12P55289 BNIP3P9-201ENST00000603714 553 ntBASIC3.3□□□□□ -1.88
CDH12P55289 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.3□□□□□ -1.88
CDH12P55289 AL357559.1-201ENST00000622228 274 ntBASIC3.3□□□□□ -1.88
CDH12P55289 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH12P55289 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CDH12P55289 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
CDH12P55289 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH12P55289 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH12P55289 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH12P55289 MFSD8-236ENST00000641509 4050 ntBASIC3.29□□□□□ -1.88
CDH12P55289 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.29□□□□□ -1.88
CDH12P55289 SNORA31-201ENST00000362607 130 ntBASIC3.29□□□□□ -1.88
CDH12P55289 RNA5SP167-201ENST00000365461 116 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms