Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 POLR3GP2-201ENST00000588366 668 ntBASIC3.91□□□□□ -1.78
CACNA2D1P54289 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CACNA2D1P54289 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.91□□□□□ -1.78
CACNA2D1P54289 AC004972.1-201ENST00000623934 2209 ntBASIC3.91□□□□□ -1.78
CACNA2D1P54289 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CACNA2D1P54289 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CACNA2D1P54289 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CACNA2D1P54289 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CACNA2D1P54289 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
CACNA2D1P54289 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
CACNA2D1P54289 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
CACNA2D1P54289 AC007823.1-201ENST00000569932 1566 ntBASIC3.9□□□□□ -1.78
CACNA2D1P54289 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.9□□□□□ -1.79
CACNA2D1P54289 Y_RNA.128-201ENST00000363391 112 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 U3.11-201ENST00000364476 212 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 SNORD42.2-201ENST00000365570 69 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CACNA2D1P54289 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CACNA2D1P54289 HLFP1-201ENST00000402375 499 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 RNU2-15P-201ENST00000410692 191 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 RNU2-62P-201ENST00000410868 191 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 RPL7L1P10-201ENST00000427790 463 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 HMGB3P11-201ENST00000440127 604 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 AL353691.1-201ENST00000451332 387 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 SNORD108-201ENST00000459332 71 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 AC004801.2-202ENST00000463559 283 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 AC126389.1-201ENST00000477436 290 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 AC027575.1-201ENST00000481064 460 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.9□□□□□ -1.79
CACNA2D1P54289 FAM206BP-201ENST00000510179 541 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.9□□□□□ -1.79
CACNA2D1P54289 RNU6-1170P-201ENST00000515974 106 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 RNU6-559P-201ENST00000516151 98 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 RNU6-1038P-201ENST00000516516 104 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 HMGB1P41-201ENST00000520234 440 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 ELOCP31-201ENST00000540463 467 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 COX6CP3-201ENST00000580869 223 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 MIR4775-201ENST00000581168 75 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.9□□□□□ -1.79
CACNA2D1P54289 AL627309.6-201ENST00000606857 840 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.9□□□□□ -1.79
CACNA2D1P54289 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.9□□□□□ -1.79
CACNA2D1P54289 AC130324.3-201ENST00000614165 542 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 AL590099.1-201ENST00000615276 138 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 uc_338.15-201ENST00000615470 191 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 AC084781.2-201ENST00000615568 161 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 AC006065.5-201ENST00000623427 349 ntBASIC3.9□□□□□ -1.79
CACNA2D1P54289 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.9□□□□□ -1.79
CACNA2D1P54289 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.9□□□□□ -1.79
CACNA2D1P54289 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CACNA2D1P54289 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CACNA2D1P54289 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.9□□□□□ -1.79
CACNA2D1P54289 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CACNA2D1P54289 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.9□□□□□ -1.79
CACNA2D1P54289 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.89□□□□□ -1.79
CACNA2D1P54289 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CACNA2D1P54289 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.89□□□□□ -1.79
CACNA2D1P54289 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CACNA2D1P54289 HSPE1P11-201ENST00000339579 310 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 Y_RNA.100-201ENST00000363141 102 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 RNU6-522P-201ENST00000364497 107 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 Y_RNA.301-201ENST00000364990 103 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 SNORA4.3-201ENST00000365564 137 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 RNU6-641P-201ENST00000384006 107 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 SNORD116-29-201ENST00000384516 83 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 AL606923.1-201ENST00000406616 190 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 RNU4-14P-201ENST00000410858 122 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 RNU6-1304P-201ENST00000411374 106 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 AC093578.1-201ENST00000415219 368 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.89□□□□□ -1.79
CACNA2D1P54289 FTH1P6-201ENST00000430768 320 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 GTF2IP13-201ENST00000438487 386 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 RPL23AP33-201ENST00000442301 452 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 RPL29P29-201ENST00000448725 423 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.89□□□□□ -1.79
CACNA2D1P54289 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.89□□□□□ -1.79
CACNA2D1P54289 RNU7-182P-201ENST00000459009 62 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 RNU7-170P-201ENST00000459303 61 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 AP000926.1-201ENST00000479573 241 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.89□□□□□ -1.79
CACNA2D1P54289 AC116562.3-201ENST00000506136 177 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 SLC25A15P5-201ENST00000508033 253 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.89□□□□□ -1.79
CACNA2D1P54289 AC005741.1-201ENST00000511094 432 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 HIGD1AP3-201ENST00000515857 278 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.89□□□□□ -1.79
CACNA2D1P54289 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.89□□□□□ -1.79
CACNA2D1P54289 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.89□□□□□ -1.79
CACNA2D1P54289 AC011979.2-201ENST00000527568 352 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 AC068587.5-201ENST00000528506 175 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.89□□□□□ -1.79
CACNA2D1P54289 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.89□□□□□ -1.79
CACNA2D1P54289 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.89□□□□□ -1.79
CACNA2D1P54289 NCAPGP2-201ENST00000557911 754 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.89□□□□□ -1.79
CACNA2D1P54289 AC006504.6-201ENST00000590142 199 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.89□□□□□ -1.79
CACNA2D1P54289 CTHRC1P1-201ENST00000605383 469 ntBASIC3.89□□□□□ -1.79
CACNA2D1P54289 SNORA51-201ENST00000606420 132 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms