Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LIMK1P53667 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.15□□□□□ -1.9
LIMK1P53667 RNA5SP383-201ENST00000362934 120 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 SNORA71.1-201ENST00000364523 117 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 RNY3P13-201ENST00000365542 102 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 SNORA26.8-201ENST00000391306 124 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 RPL21P75-201ENST00000396599 483 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 RPL21P28-201ENST00000401418 483 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 FO393413.1-201ENST00000402892 195 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 AL592114.1-201ENST00000403842 483 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 AL021407.1-201ENST00000404531 386 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 SPA17P1-201ENST00000416656 452 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 AL353777.1-201ENST00000425552 326 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 AL356583.2-201ENST00000426536 280 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.15□□□□□ -1.91
LIMK1P53667 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.15□□□□□ -1.91
LIMK1P53667 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.15□□□□□ -1.91
LIMK1P53667 TAAR7P-201ENST00000436141 242 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.15□□□□□ -1.91
LIMK1P53667 SSXP1-201ENST00000453640 473 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.15□□□□□ -1.91
LIMK1P53667 HMGN1P18-201ENST00000457642 277 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 RPL21P39-201ENST00000463605 483 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 MTND4LP3-201ENST00000468320 276 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 RPL21P93-201ENST00000480465 489 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 AC233702.1-201ENST00000482905 502 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 AC087190.1-201ENST00000484462 480 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 AC109486.1-201ENST00000486833 374 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 AC093591.1-201ENST00000491435 481 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 RPL21P16-201ENST00000495531 483 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 YWHAEP4-201ENST00000505390 198 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.15□□□□□ -1.91
LIMK1P53667 SNORA64.4-201ENST00000516632 81 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LIMK1P53667 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.15□□□□□ -1.91
LIMK1P53667 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.15□□□□□ -1.91
LIMK1P53667 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.15□□□□□ -1.91
LIMK1P53667 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.15□□□□□ -1.91
LIMK1P53667 MIR548AB-201ENST00000584917 84 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.15□□□□□ -1.91
LIMK1P53667 NRBF2P5-201ENST00000603087 788 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 AC004696.1-201ENST00000614345 607 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.15□□□□□ -1.91
LIMK1P53667 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
LIMK1P53667 OR5H6-203ENST00000642105 978 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LIMK1P53667 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
LIMK1P53667 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
LIMK1P53667 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.15□□□□□ -1.91
LIMK1P53667 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
LIMK1P53667 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LIMK1P53667 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LIMK1P53667 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LIMK1P53667 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LIMK1P53667 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
LIMK1P53667 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
LIMK1P53667 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
LIMK1P53667 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LIMK1P53667 RNY4P16-201ENST00000364768 94 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 SNORA54-201ENST00000384281 123 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LIMK1P53667 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LIMK1P53667 Y_RNA.608-201ENST00000410647 95 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 RNA5SP492-201ENST00000411330 114 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.14□□□□□ -1.91
LIMK1P53667 NDUFB4P5-201ENST00000415445 361 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 USP9YP13-201ENST00000417797 480 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 BTF3L4P3-201ENST00000418879 476 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 RPS15AP12-201ENST00000419498 388 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 AL512844.2-201ENST00000433990 593 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.14□□□□□ -1.91
LIMK1P53667 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.14□□□□□ -1.91
LIMK1P53667 CENPBD1P1-201ENST00000464061 469 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 UBL5P3-201ENST00000475112 231 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 AC010486.3-201ENST00000511602 785 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 RNU1-143P-201ENST00000516296 146 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 RNA5SP367-201ENST00000516557 118 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.14□□□□□ -1.91
LIMK1P53667 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.14□□□□□ -1.91
LIMK1P53667 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.14□□□□□ -1.91
LIMK1P53667 HMGB1P6-201ENST00000569046 646 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.14□□□□□ -1.91
LIMK1P53667 AC012065.4-201ENST00000602445 679 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 AL391813.2-201ENST00000609113 322 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 U1.23-201ENST00000610293 146 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 RNU1-68P-201ENST00000615382 146 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 AC006338.1-201ENST00000618453 749 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 AC022079.1-201ENST00000621546 602 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 U1.39-201ENST00000621562 146 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 AC009878.1-201ENST00000621819 340 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 AC025048.6-202ENST00000627667 438 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 MIR3974-201ENST00000637126 96 ntBASIC3.14□□□□□ -1.91
LIMK1P53667 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LIMK1P53667 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms