Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.83□□□□□ -1.8
COPAP53621 HMGN1P11-201ENST00000508668 303 ntBASIC3.83□□□□□ -1.8
COPAP53621 AC104619.4-201ENST00000510773 249 ntBASIC3.83□□□□□ -1.8
COPAP53621 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.83□□□□□ -1.8
COPAP53621 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.83□□□□□ -1.8
COPAP53621 RNA5SP164-201ENST00000516533 110 ntBASIC3.83□□□□□ -1.8
COPAP53621 AC118273.2-201ENST00000532092 465 ntBASIC3.83□□□□□ -1.8
COPAP53621 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.83□□□□□ -1.8
COPAP53621 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.83□□□□□ -1.8
COPAP53621 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.83□□□□□ -1.8
COPAP53621 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.83□□□□□ -1.8
COPAP53621 AC106900.2-201ENST00000604994 317 ntBASIC3.83□□□□□ -1.8
COPAP53621 AC019176.2-201ENST00000611579 315 ntBASIC3.83□□□□□ -1.8
COPAP53621 AC012314.7-201ENST00000619693 93 ntBASIC3.83□□□□□ -1.8
COPAP53621 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.83□□□□□ -1.8
COPAP53621 FER-210ENST00000628534 558 ntTSL 5 BASIC3.83□□□□□ -1.8
COPAP53621 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
COPAP53621 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.83□□□□□ -1.8
COPAP53621 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.83□□□□□ -1.8
COPAP53621 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.83□□□□□ -1.8
COPAP53621 Y_RNA.88-201ENST00000363029 99 ntBASIC3.82□□□□□ -1.8
COPAP53621 RNA5SP51-201ENST00000364750 119 ntBASIC3.82□□□□□ -1.8
COPAP53621 RNU4-48P-201ENST00000365559 182 ntBASIC3.82□□□□□ -1.8
COPAP53621 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
COPAP53621 RNU6-1158P-201ENST00000391167 107 ntBASIC3.82□□□□□ -1.8
COPAP53621 MIR1290-201ENST00000408735 78 ntBASIC3.82□□□□□ -1.8
COPAP53621 AC068533.1-201ENST00000418542 415 ntBASIC3.82□□□□□ -1.8
COPAP53621 RPL27AP8-201ENST00000424277 446 ntBASIC3.82□□□□□ -1.8
COPAP53621 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.82□□□□□ -1.8
COPAP53621 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.82□□□□□ -1.8
COPAP53621 HMGB1P31-201ENST00000437242 427 ntBASIC3.82□□□□□ -1.8
COPAP53621 MTCO3P18-201ENST00000440206 761 ntBASIC3.82□□□□□ -1.8
COPAP53621 NEFMP1-201ENST00000443423 1006 ntBASIC3.82□□□□□ -1.8
COPAP53621 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.82□□□□□ -1.8
COPAP53621 DPPA3P1-201ENST00000448050 469 ntBASIC3.82□□□□□ -1.8
COPAP53621 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.82□□□□□ -1.8
COPAP53621 RPL7P49-201ENST00000471402 708 ntBASIC3.82□□□□□ -1.8
COPAP53621 AC106707.2-201ENST00000484182 374 ntBASIC3.82□□□□□ -1.8
COPAP53621 SNORD27.1-201ENST00000516319 72 ntBASIC3.82□□□□□ -1.8
COPAP53621 RN7SKP83-201ENST00000516512 178 ntBASIC3.82□□□□□ -1.8
COPAP53621 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.82□□□□□ -1.8
COPAP53621 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.82□□□□□ -1.8
COPAP53621 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.82□□□□□ -1.8
COPAP53621 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COPAP53621 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COPAP53621 MIR3922-201ENST00000585192 84 ntBASIC3.82□□□□□ -1.8
COPAP53621 AC008752.3-201ENST00000588113 712 ntBASIC3.82□□□□□ -1.8
COPAP53621 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.82□□□□□ -1.8
COPAP53621 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.82□□□□□ -1.8
COPAP53621 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.82□□□□□ -1.8
COPAP53621 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COPAP53621 U7.8-201ENST00000619968 63 ntBASIC3.82□□□□□ -1.8
COPAP53621 AC099654.14-201ENST00000638599 341 ntBASIC3.82□□□□□ -1.8
COPAP53621 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.82□□□□□ -1.8
COPAP53621 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.82□□□□□ -1.8
COPAP53621 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COPAP53621 CKAP2P1-201ENST00000555477 2049 ntBASIC3.82□□□□□ -1.8
COPAP53621 CEP170P1-201ENST00000502249 4587 ntBASIC3.82□□□□□ -1.8
COPAP53621 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COPAP53621 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
COPAP53621 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COPAP53621 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COPAP53621 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COPAP53621 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COPAP53621 RNU6-179P-201ENST00000363350 107 ntBASIC3.81□□□□□ -1.8
COPAP53621 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
COPAP53621 SMIM11P1-201ENST00000369586 178 ntBASIC3.81□□□□□ -1.8
COPAP53621 MIR454-201ENST00000390180 115 ntBASIC3.81□□□□□ -1.8
COPAP53621 SOD2P1-201ENST00000396543 562 ntBASIC3.81□□□□□ -1.8
COPAP53621 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COPAP53621 AL591416.1-201ENST00000404015 867 ntBASIC3.81□□□□□ -1.8
COPAP53621 OR51A5P-201ENST00000415429 942 ntBASIC3.81□□□□□ -1.8
COPAP53621 AC114491.1-201ENST00000416095 246 ntBASIC3.81□□□□□ -1.8
COPAP53621 AL139413.1-201ENST00000421309 217 ntBASIC3.81□□□□□ -1.8
COPAP53621 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.81□□□□□ -1.8
COPAP53621 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.81□□□□□ -1.8
COPAP53621 RPL36AP6-201ENST00000435770 321 ntBASIC3.81□□□□□ -1.8
COPAP53621 HSPD1P21-201ENST00000436541 245 ntBASIC3.81□□□□□ -1.8
COPAP53621 AC016691.1-201ENST00000441321 413 ntBASIC3.81□□□□□ -1.8
COPAP53621 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.81□□□□□ -1.8
COPAP53621 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COPAP53621 PRSS3P4-201ENST00000453323 162 ntBASIC3.81□□□□□ -1.8
COPAP53621 AL356010.1-201ENST00000456364 102 ntBASIC3.81□□□□□ -1.8
COPAP53621 HMGN2P13-201ENST00000476476 274 ntBASIC3.81□□□□□ -1.8
COPAP53621 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.81□□□□□ -1.8
COPAP53621 RAC1P2-201ENST00000511164 579 ntBASIC3.81□□□□□ -1.8
COPAP53621 SNORA40.12-201ENST00000516329 111 ntBASIC3.81□□□□□ -1.8
COPAP53621 SNORA70.16-201ENST00000516390 95 ntBASIC3.81□□□□□ -1.8
COPAP53621 RN7SKP258-201ENST00000517151 304 ntBASIC3.81□□□□□ -1.8
COPAP53621 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.81□□□□□ -1.8
COPAP53621 AP006587.4-201ENST00000526053 529 ntBASIC3.81□□□□□ -1.8
COPAP53621 OR5AL2P-201ENST00000532185 920 ntBASIC3.81□□□□□ -1.8
COPAP53621 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.81□□□□□ -1.8
COPAP53621 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.81□□□□□ -1.8
COPAP53621 AL121576.1-201ENST00000556055 276 ntBASIC3.81□□□□□ -1.8
COPAP53621 AC090877.1-201ENST00000561418 344 ntBASIC3.81□□□□□ -1.8
COPAP53621 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.81□□□□□ -1.8
COPAP53621 AL020991.1-201ENST00000612314 373 ntBASIC3.81□□□□□ -1.8
COPAP53621 AC084757.4-201ENST00000616350 526 ntBASIC3.81□□□□□ -1.8
COPAP53621 AC068831.7-201ENST00000616954 363 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms