Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AF213884.2-201ENST00000510417 903 ntBASIC1.43□□□□□ -2.18
GTF2A1P52655 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.43□□□□□ -2.18
GTF2A1P52655 AC017037.2-201ENST00000513850 890 ntBASIC1.43□□□□□ -2.18
GTF2A1P52655 RNU5A-7P-201ENST00000515979 116 ntBASIC1.43□□□□□ -2.18
GTF2A1P52655 RNU6-1256P-201ENST00000516539 103 ntBASIC1.43□□□□□ -2.18
GTF2A1P52655 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.43□□□□□ -2.18
GTF2A1P52655 AC107953.1-201ENST00000522216 297 ntBASIC1.43□□□□□ -2.18
GTF2A1P52655 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.43□□□□□ -2.18
GTF2A1P52655 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.43□□□□□ -2.18
GTF2A1P52655 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.43□□□□□ -2.18
GTF2A1P52655 SUB1P3-201ENST00000564581 315 ntBASIC1.43□□□□□ -2.18
GTF2A1P52655 AC105245.1-201ENST00000581934 244 ntBASIC1.43□□□□□ -2.18
GTF2A1P52655 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.43□□□□□ -2.18
GTF2A1P52655 SNORD39.3-201ENST00000584451 71 ntBASIC1.43□□□□□ -2.18
GTF2A1P52655 AL050343.2-201ENST00000607338 280 ntBASIC1.43□□□□□ -2.18
GTF2A1P52655 AC103810.8-201ENST00000607347 118 ntBASIC1.43□□□□□ -2.18
GTF2A1P52655 AC080013.4-201ENST00000607624 649 ntBASIC1.43□□□□□ -2.18
GTF2A1P52655 AC084768.2-201ENST00000622736 221 ntBASIC1.43□□□□□ -2.18
GTF2A1P52655 AC110994.2-201ENST00000635481 492 ntBASIC1.43□□□□□ -2.18
GTF2A1P52655 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.43□□□□□ -2.18
GTF2A1P52655 SNORD26-201ENST00000384147 75 ntBASIC1.42□□□□□ -2.18
GTF2A1P52655 MCTS2P-201ENST00000394552 546 ntBASIC1.42□□□□□ -2.18
GTF2A1P52655 MIR1304-201ENST00000408243 91 ntBASIC1.42□□□□□ -2.18
GTF2A1P52655 RNU2-47P-201ENST00000410649 186 ntBASIC1.42□□□□□ -2.18
GTF2A1P52655 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.42□□□□□ -2.18
GTF2A1P52655 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.42□□□□□ -2.18
GTF2A1P52655 AC007677.1-201ENST00000445757 515 ntBASIC1.42□□□□□ -2.18
GTF2A1P52655 AC069528.1-202ENST00000482888 637 ntBASIC1.42□□□□□ -2.18
GTF2A1P52655 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.42□□□□□ -2.18
GTF2A1P52655 RNA5SP182-201ENST00000516064 82 ntBASIC1.42□□□□□ -2.18
GTF2A1P52655 RN7SKP179-201ENST00000516126 217 ntBASIC1.42□□□□□ -2.18
GTF2A1P52655 AP004247.1-201ENST00000531556 1289 ntBASIC1.42□□□□□ -2.18
GTF2A1P52655 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.42□□□□□ -2.18
GTF2A1P52655 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.42□□□□□ -2.18
GTF2A1P52655 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.42□□□□□ -2.18
GTF2A1P52655 AC027104.1-201ENST00000563702 681 ntBASIC1.42□□□□□ -2.18
GTF2A1P52655 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.42□□□□□ -2.18
GTF2A1P52655 AC016925.2-201ENST00000605108 242 ntBASIC1.42□□□□□ -2.18
GTF2A1P52655 MIR8081-201ENST00000611533 95 ntBASIC1.42□□□□□ -2.18
GTF2A1P52655 AL589743.7-201ENST00000612637 233 ntBASIC1.42□□□□□ -2.18
GTF2A1P52655 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
GTF2A1P52655 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
GTF2A1P52655 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
GTF2A1P52655 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
GTF2A1P52655 HMGB1P17-201ENST00000403495 628 ntBASIC1.41□□□□□ -2.18
GTF2A1P52655 RNU2-15P-201ENST00000410692 191 ntBASIC1.41□□□□□ -2.18
GTF2A1P52655 RNA5SP508-201ENST00000411327 119 ntBASIC1.41□□□□□ -2.18
GTF2A1P52655 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.41□□□□□ -2.18
GTF2A1P52655 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.41□□□□□ -2.18
GTF2A1P52655 AL096803.2-201ENST00000450032 677 ntBASIC1.41□□□□□ -2.18
GTF2A1P52655 RFC5P1-201ENST00000454419 874 ntBASIC1.41□□□□□ -2.18
GTF2A1P52655 SUMO2P2-201ENST00000456482 255 ntBASIC1.41□□□□□ -2.18
GTF2A1P52655 RNA5SP137-201ENST00000516833 135 ntBASIC1.41□□□□□ -2.18
GTF2A1P52655 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.41□□□□□ -2.18
GTF2A1P52655 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
GTF2A1P52655 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.41□□□□□ -2.18
GTF2A1P52655 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.41□□□□□ -2.18
GTF2A1P52655 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
GTF2A1P52655 ZNF705CP-201ENST00000530515 889 ntBASIC1.41□□□□□ -2.18
GTF2A1P52655 AC009268.1-201ENST00000561352 1203 ntBASIC1.41□□□□□ -2.18
GTF2A1P52655 AC093510.2-201ENST00000562820 896 ntBASIC1.41□□□□□ -2.18
GTF2A1P52655 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.41□□□□□ -2.18
GTF2A1P52655 BNIP3P22-201ENST00000593399 556 ntBASIC1.41□□□□□ -2.18
GTF2A1P52655 AL022067.1-201ENST00000602426 454 ntBASIC1.41□□□□□ -2.18
GTF2A1P52655 AL671309.1-201ENST00000603750 544 ntBASIC1.41□□□□□ -2.18
GTF2A1P52655 AL031176.1-201ENST00000604554 466 ntBASIC1.41□□□□□ -2.18
GTF2A1P52655 AC093673.2-201ENST00000609674 331 ntBASIC1.41□□□□□ -2.18
GTF2A1P52655 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
GTF2A1P52655 AP000776.1-201ENST00000530032 1663 ntBASIC1.41□□□□□ -2.18
GTF2A1P52655 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
GTF2A1P52655 UBE2L2-201ENST00000254302 429 ntBASIC1.4□□□□□ -2.19
GTF2A1P52655 RNU6-939P-201ENST00000384634 107 ntBASIC1.4□□□□□ -2.19
GTF2A1P52655 ZNF92P1Y-201ENST00000415010 1191 ntBASIC1.4□□□□□ -2.19
GTF2A1P52655 AL445669.1-201ENST00000426743 755 ntBASIC1.4□□□□□ -2.19
GTF2A1P52655 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
GTF2A1P52655 GTF2IP7-202ENST00000436677 309 ntBASIC1.4□□□□□ -2.19
GTF2A1P52655 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.4□□□□□ -2.19
GTF2A1P52655 MTND6P13-201ENST00000443510 523 ntBASIC1.4□□□□□ -2.19
GTF2A1P52655 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.4□□□□□ -2.19
GTF2A1P52655 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.4□□□□□ -2.19
GTF2A1P52655 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.4□□□□□ -2.19
GTF2A1P52655 AC093801.2-201ENST00000503966 1050 ntBASIC1.4□□□□□ -2.19
GTF2A1P52655 AC109471.1-201ENST00000511631 612 ntBASIC1.4□□□□□ -2.19
GTF2A1P52655 RNU6-889P-201ENST00000517189 103 ntBASIC1.4□□□□□ -2.19
GTF2A1P52655 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.4□□□□□ -2.19
GTF2A1P52655 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.4□□□□□ -2.19
GTF2A1P52655 AC022254.1-201ENST00000567857 235 ntBASIC1.4□□□□□ -2.19
GTF2A1P52655 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.4□□□□□ -2.19
GTF2A1P52655 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.4□□□□□ -2.19
GTF2A1P52655 AC006338.1-201ENST00000618453 749 ntBASIC1.4□□□□□ -2.19
GTF2A1P52655 AC008443.7-201ENST00000622195 246 ntBASIC1.4□□□□□ -2.19
GTF2A1P52655 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
GTF2A1P52655 MTND4P23-201ENST00000447723 1363 ntBASIC1.39□□□□□ -2.19
GTF2A1P52655 RNU6-819P-201ENST00000364116 107 ntBASIC1.39□□□□□ -2.19
GTF2A1P52655 RNU6-338P-201ENST00000383888 105 ntBASIC1.39□□□□□ -2.19
GTF2A1P52655 MIR7-1-201ENST00000384871 110 ntBASIC1.39□□□□□ -2.19
GTF2A1P52655 RNA5SP212-201ENST00000391223 107 ntBASIC1.39□□□□□ -2.19
GTF2A1P52655 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
GTF2A1P52655 BX276092.3-201ENST00000424182 230 ntBASIC1.39□□□□□ -2.19
GTF2A1P52655 AL512637.2-201ENST00000431287 1256 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms