Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
BRCA2P51587 UBE2FP3-201ENST00000436366 524 ntBASIC0.67□□□□□ -2.3
BRCA2P51587 AC109927.2-201ENST00000506416 303 ntBASIC0.67□□□□□ -2.3
BRCA2P51587 Clostridiales-1.3-201ENST00000637703 147 ntBASIC0.67□□□□□ -2.3
BRCA2P51587 SNRPGP3-201ENST00000469405 227 ntBASIC0.67□□□□□ -2.3
BRCA2P51587 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.67□□□□□ -2.3
BRCA2P51587 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
BRCA2P51587 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
BRCA2P51587 IL33-203ENST00000456383 2501 ntTSL 5 BASIC0.67□□□□□ -2.3
BRCA2P51587 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.66□□□□□ -2.3
BRCA2P51587 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
BRCA2P51587 MIR144-201ENST00000384886 86 ntBASIC0.66□□□□□ -2.3
BRCA2P51587 PTENP1-201ENST00000447117 1215 ntBASIC0.66□□□□□ -2.3
BRCA2P51587 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.66□□□□□ -2.3
BRCA2P51587 MTCO1P23-201ENST00000415223 1526 ntBASIC0.66□□□□□ -2.3
BRCA2P51587 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
BRCA2P51587 RNU6-146P-201ENST00000384602 108 ntBASIC0.66□□□□□ -2.3
BRCA2P51587 RNA5SP63-201ENST00000391225 112 ntBASIC0.66□□□□□ -2.3
BRCA2P51587 AC013470.3-201ENST00000420252 1194 ntBASIC0.66□□□□□ -2.3
BRCA2P51587 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC0.66□□□□□ -2.3
BRCA2P51587 SDCBPP1-201ENST00000440192 890 ntBASIC0.66□□□□□ -2.3
BRCA2P51587 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.66□□□□□ -2.3
BRCA2P51587 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.66□□□□□ -2.3
BRCA2P51587 IGLVI-20-201ENST00000519296 130 ntBASIC0.66□□□□□ -2.3
BRCA2P51587 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC0.66□□□□□ -2.3
BRCA2P51587 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.66□□□□□ -2.3
BRCA2P51587 RPL21P136-201ENST00000605378 396 ntBASIC0.66□□□□□ -2.3
BRCA2P51587 AC080100.1-201ENST00000624239 5356 ntBASIC0.66□□□□□ -2.3
BRCA2P51587 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.66□□□□□ -2.3
BRCA2P51587 AL161788.1-201ENST00000441805 169 ntBASIC0.66□□□□□ -2.3
BRCA2P51587 MTND4LP3-201ENST00000468320 276 ntBASIC0.66□□□□□ -2.3
BRCA2P51587 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.66□□□□□ -2.3
BRCA2P51587 OOSP1P2-201ENST00000579644 351 ntBASIC0.66□□□□□ -2.3
BRCA2P51587 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC0.66□□□□□ -2.3
BRCA2P51587 AP001005.3-201ENST00000622049 129 ntBASIC0.66□□□□□ -2.3
BRCA2P51587 AC138915.1-201ENST00000565427 1685 ntBASIC0.65□□□□□ -2.3
BRCA2P51587 HAUS6P2-201ENST00000433254 2404 ntBASIC0.65□□□□□ -2.31
BRCA2P51587 GPM6BP3-201ENST00000442797 145 ntBASIC0.65□□□□□ -2.31
BRCA2P51587 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.65□□□□□ -2.31
BRCA2P51587 RNU1-104P-201ENST00000517280 175 ntBASIC0.65□□□□□ -2.31
BRCA2P51587 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.65□□□□□ -2.31
BRCA2P51587 MIR1468-201ENST00000410600 86 ntBASIC0.65□□□□□ -2.31
BRCA2P51587 C1DP3-201ENST00000455013 423 ntBASIC0.65□□□□□ -2.31
BRCA2P51587 AC117454.1-201ENST00000491120 168 ntBASIC0.65□□□□□ -2.31
BRCA2P51587 AC022880.1-201ENST00000534017 973 ntBASIC0.65□□□□□ -2.31
BRCA2P51587 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.65□□□□□ -2.31
BRCA2P51587 U8.3-201ENST00000363321 132 ntBASIC0.64□□□□□ -2.31
BRCA2P51587 HMGN2P10-201ENST00000448085 265 ntBASIC0.64□□□□□ -2.31
BRCA2P51587 RPL37P6-202ENST00000464216 403 ntBASIC0.64□□□□□ -2.31
BRCA2P51587 AC091304.6-201ENST00000619761 202 ntBASIC0.64□□□□□ -2.31
BRCA2P51587 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.64□□□□□ -2.31
BRCA2P51587 MIR203B-201ENST00000636080 86 ntBASIC0.64□□□□□ -2.31
BRCA2P51587 MIR6866-201ENST00000638146 69 ntBASIC0.64□□□□□ -2.31
BRCA2P51587 AC091812.1-201ENST00000432235 1948 ntBASIC0.64□□□□□ -2.31
BRCA2P51587 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.64□□□□□ -2.31
BRCA2P51587 NOP56P3-201ENST00000549457 385 ntBASIC0.64□□□□□ -2.31
BRCA2P51587 MIR6840-201ENST00000611937 71 ntBASIC0.64□□□□□ -2.31
BRCA2P51587 AC048347.1-201ENST00000624621 427 ntBASIC0.64□□□□□ -2.31
BRCA2P51587 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.64□□□□□ -2.31
BRCA2P51587 SNRPEP4-201ENST00000435815 279 ntBASIC0.64□□□□□ -2.31
BRCA2P51587 AC073592.7-201ENST00000623659 507 ntBASIC0.64□□□□□ -2.31
BRCA2P51587 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.63□□□□□ -2.31
BRCA2P51587 KLF3P2-201ENST00000465138 268 ntBASIC0.63□□□□□ -2.31
BRCA2P51587 AC005741.1-201ENST00000511094 432 ntBASIC0.63□□□□□ -2.31
BRCA2P51587 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.63□□□□□ -2.31
BRCA2P51587 RPL17P49-201ENST00000443728 411 ntBASIC0.63□□□□□ -2.31
BRCA2P51587 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.63□□□□□ -2.31
BRCA2P51587 TRBVB-201ENST00000477100 408 ntBASIC0.63□□□□□ -2.31
BRCA2P51587 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC0.63□□□□□ -2.31
BRCA2P51587 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.63□□□□□ -2.31
BRCA2P51587 DBF4P1-201ENST00000412976 1892 ntBASIC0.63□□□□□ -2.31
BRCA2P51587 SNRPGP12-201ENST00000449481 213 ntBASIC0.63□□□□□ -2.31
BRCA2P51587 AC092754.2-201ENST00000463506 460 ntBASIC0.63□□□□□ -2.31
BRCA2P51587 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
BRCA2P51587 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
BRCA2P51587 AP003355.1-201ENST00000518956 587 ntBASIC0.62□□□□□ -2.31
BRCA2P51587 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.62□□□□□ -2.31
BRCA2P51587 AC068620.3-201ENST00000602749 560 ntBASIC0.62□□□□□ -2.31
BRCA2P51587 SNORD95.1-201ENST00000364099 68 ntBASIC0.62□□□□□ -2.31
BRCA2P51587 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC0.62□□□□□ -2.31
BRCA2P51587 HMGN2P9-201ENST00000476875 229 ntBASIC0.62□□□□□ -2.31
BRCA2P51587 RPS27P26-201ENST00000494583 239 ntBASIC0.62□□□□□ -2.31
BRCA2P51587 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
BRCA2P51587 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.62□□□□□ -2.31
BRCA2P51587 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
BRCA2P51587 MTND2P16-201ENST00000419987 799 ntBASIC0.61□□□□□ -2.31
BRCA2P51587 AC092628.1-201ENST00000436250 252 ntBASIC0.61□□□□□ -2.31
BRCA2P51587 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.61□□□□□ -2.31
BRCA2P51587 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.61□□□□□ -2.31
BRCA2P51587 RPS24P6-201ENST00000452670 400 ntBASIC0.61□□□□□ -2.31
BRCA2P51587 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.61□□□□□ -2.31
BRCA2P51587 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC0.61□□□□□ -2.31
BRCA2P51587 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.61□□□□□ -2.31
BRCA2P51587 MZT1P2-201ENST00000604387 248 ntBASIC0.61□□□□□ -2.31
BRCA2P51587 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC0.61□□□□□ -2.31
BRCA2P51587 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
BRCA2P51587 RNA5SP295-201ENST00000362655 121 ntBASIC0.61□□□□□ -2.31
BRCA2P51587 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.61□□□□□ -2.31
BRCA2P51587 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
BRCA2P51587 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms