Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.48□□□□□ -1.69
MRE11P49959 AC006011.1-201ENST00000442758 349 ntBASIC4.48□□□□□ -1.69
MRE11P49959 NOTCH2P1-201ENST00000443481 624 ntBASIC4.48□□□□□ -1.69
MRE11P49959 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.48□□□□□ -1.69
MRE11P49959 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.48□□□□□ -1.69
MRE11P49959 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.48□□□□□ -1.69
MRE11P49959 MRPS31P2-201ENST00000451581 518 ntBASIC4.48□□□□□ -1.69
MRE11P49959 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.48□□□□□ -1.69
MRE11P49959 AC096576.1-201ENST00000489014 359 ntBASIC4.48□□□□□ -1.69
MRE11P49959 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
MRE11P49959 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.48□□□□□ -1.69
MRE11P49959 AC004062.1-201ENST00000509926 645 ntBASIC4.48□□□□□ -1.69
MRE11P49959 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.48□□□□□ -1.69
MRE11P49959 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.48□□□□□ -1.69
MRE11P49959 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.48□□□□□ -1.69
MRE11P49959 RN7SKP219-201ENST00000516825 296 ntBASIC4.48□□□□□ -1.69
MRE11P49959 RN7SKP116-201ENST00000516902 319 ntBASIC4.48□□□□□ -1.69
MRE11P49959 RN7SKP256-201ENST00000517201 314 ntBASIC4.48□□□□□ -1.69
MRE11P49959 AC103843.2-201ENST00000530523 682 ntBASIC4.48□□□□□ -1.69
MRE11P49959 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.48□□□□□ -1.69
MRE11P49959 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.48□□□□□ -1.69
MRE11P49959 AC128657.1-201ENST00000549459 145 ntBASIC4.48□□□□□ -1.69
MRE11P49959 TVP23BP1-201ENST00000557500 617 ntBASIC4.48□□□□□ -1.69
MRE11P49959 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.48□□□□□ -1.69
MRE11P49959 AC113403.1-201ENST00000604910 193 ntBASIC4.48□□□□□ -1.69
MRE11P49959 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.48□□□□□ -1.69
MRE11P49959 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.48□□□□□ -1.69
MRE11P49959 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.48□□□□□ -1.69
MRE11P49959 AL713922.2-201ENST00000619384 716 ntBASIC4.48□□□□□ -1.69
MRE11P49959 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.48□□□□□ -1.69
MRE11P49959 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.48□□□□□ -1.69
MRE11P49959 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
MRE11P49959 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
MRE11P49959 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
MRE11P49959 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.48□□□□□ -1.69
MRE11P49959 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.48□□□□□ -1.69
MRE11P49959 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
MRE11P49959 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
MRE11P49959 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
MRE11P49959 RNU1-14P-201ENST00000362759 152 ntBASIC4.47□□□□□ -1.69
MRE11P49959 RNU6-283P-201ENST00000364788 107 ntBASIC4.47□□□□□ -1.69
MRE11P49959 Y_RNA.384-201ENST00000383909 102 ntBASIC4.47□□□□□ -1.69
MRE11P49959 RNU6-831P-201ENST00000384548 107 ntBASIC4.47□□□□□ -1.69
MRE11P49959 RNA5SP36-201ENST00000410197 133 ntBASIC4.47□□□□□ -1.69
MRE11P49959 RPL31P2-201ENST00000413849 377 ntBASIC4.47□□□□□ -1.69
MRE11P49959 RPL31P12-201ENST00000422587 358 ntBASIC4.47□□□□□ -1.69
MRE11P49959 MTND2P23-201ENST00000422990 651 ntBASIC4.47□□□□□ -1.69
MRE11P49959 AC017083.1-201ENST00000428093 483 ntBASIC4.47□□□□□ -1.69
MRE11P49959 MED13P1-201ENST00000428342 171 ntBASIC4.47□□□□□ -1.69
MRE11P49959 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.47□□□□□ -1.69
MRE11P49959 CYCSP43-201ENST00000438233 310 ntBASIC4.47□□□□□ -1.69
MRE11P49959 AC006480.1-201ENST00000449887 378 ntBASIC4.47□□□□□ -1.69
MRE11P49959 NIPA2P5-201ENST00000452282 464 ntBASIC4.47□□□□□ -1.69
MRE11P49959 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.47□□□□□ -1.69
MRE11P49959 AC126389.1-201ENST00000477436 290 ntBASIC4.47□□□□□ -1.69
MRE11P49959 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
MRE11P49959 COX7A2P2-201ENST00000505291 250 ntBASIC4.47□□□□□ -1.69
MRE11P49959 AC023141.12-201ENST00000512399 199 ntBASIC4.47□□□□□ -1.69
MRE11P49959 TTC39CP1-201ENST00000512513 755 ntBASIC4.47□□□□□ -1.69
MRE11P49959 Y_RNA.665-201ENST00000516177 98 ntBASIC4.47□□□□□ -1.69
MRE11P49959 Vault.1-201ENST00000516474 102 ntBASIC4.47□□□□□ -1.69
MRE11P49959 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.47□□□□□ -1.69
MRE11P49959 AC008489.1-201ENST00000524271 483 ntBASIC4.47□□□□□ -1.69
MRE11P49959 AC026464.5-201ENST00000562497 722 ntBASIC4.47□□□□□ -1.69
MRE11P49959 AC022655.2-201ENST00000577280 318 ntBASIC4.47□□□□□ -1.69
MRE11P49959 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.47□□□□□ -1.69
MRE11P49959 AL360085.1-201ENST00000604713 532 ntBASIC4.47□□□□□ -1.69
MRE11P49959 AL590099.1-201ENST00000615276 138 ntBASIC4.47□□□□□ -1.69
MRE11P49959 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.47□□□□□ -1.69
MRE11P49959 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
MRE11P49959 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
MRE11P49959 MTND5P3-201ENST00000438536 1800 ntBASIC4.46□□□□□ -1.69
MRE11P49959 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
MRE11P49959 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
MRE11P49959 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
MRE11P49959 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
MRE11P49959 AP001486.2-201ENST00000561652 5113 ntBASIC4.46□□□□□ -1.7
MRE11P49959 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.46□□□□□ -1.7
MRE11P49959 AC007685.1-201ENST00000329806 452 ntBASIC4.46□□□□□ -1.7
MRE11P49959 HSPE1P11-201ENST00000339579 310 ntBASIC4.46□□□□□ -1.7
MRE11P49959 RNU6-511P-201ENST00000363496 107 ntBASIC4.46□□□□□ -1.7
MRE11P49959 SNORA48.2-201ENST00000390926 124 ntBASIC4.46□□□□□ -1.7
MRE11P49959 U3.29-201ENST00000391296 212 ntBASIC4.46□□□□□ -1.7
MRE11P49959 RNU4-26P-201ENST00000410270 107 ntBASIC4.46□□□□□ -1.7
MRE11P49959 HMGN1P24-201ENST00000412282 298 ntBASIC4.46□□□□□ -1.7
MRE11P49959 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.46□□□□□ -1.7
MRE11P49959 RPS7P15-201ENST00000415804 584 ntBASIC4.46□□□□□ -1.7
MRE11P49959 FTH1P6-201ENST00000430768 320 ntBASIC4.46□□□□□ -1.7
MRE11P49959 AC236972.2-201ENST00000434979 310 ntBASIC4.46□□□□□ -1.7
MRE11P49959 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.46□□□□□ -1.7
MRE11P49959 AL590639.1-201ENST00000456484 337 ntBASIC4.46□□□□□ -1.7
MRE11P49959 PPP1R2P5-201ENST00000457256 603 ntBASIC4.46□□□□□ -1.7
MRE11P49959 RPS29P15-201ENST00000458329 171 ntBASIC4.46□□□□□ -1.7
MRE11P49959 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.46□□□□□ -1.7
MRE11P49959 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.46□□□□□ -1.7
MRE11P49959 AP005435.4-201ENST00000529514 284 ntBASIC4.46□□□□□ -1.7
MRE11P49959 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.46□□□□□ -1.7
MRE11P49959 MIR3186-201ENST00000577404 85 ntBASIC4.46□□□□□ -1.7
MRE11P49959 FAM27D1-201ENST00000612308 341 ntBASIC4.46□□□□□ -1.7
MRE11P49959 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms